Pairwise Alignments

Query, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 337 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 36/250 (14%)

Query: 1   MFNGLMYALYAFLVGGILLGFHRKLMARVQCRPGPPII------QYLIHTFKFYFKELTF 54
           M   + Y  YA           RK++  +Q R GP ++      Q L    K + KE   
Sbjct: 26  MLGAIAYLTYA----------ERKVIGAMQMRKGPNVVGPFGLLQPLADGVKLFLKETII 75

Query: 55  PISAGNPLYVFVALMDVMVWMSALSIAVVFESSLLIL-IGLYILQKIVEHGCGL------ 107
           P  A   +++   LM  ++ + A ++ + F++  ++  I + +L      G G+      
Sbjct: 76  PTGANRAVFIIAPLMTFILALIAWAV-IPFDAGWVVADINVGVLYLFAVSGLGVYGIIMA 134

Query: 108 --SSGSPYGKVGGVRSVFSAAAEIPLFAAAGIVYTVT----HSLIIGDIINYQAVNGPLI 161
             +S S Y  +GG+RS   AA  +    A G++         S+ + DI+  Q   G   
Sbjct: 135 GWASNSKYAFLGGLRS---AAQMVSYEVAMGLIIIAVILSAGSMNLSDIVEAQR-QGVWY 190

Query: 162 FQLPICAFAVFVL-VLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAWFVL 219
           F      F +F++ +L++   +PF + + + +++SGY  E+     A+  +G+     ++
Sbjct: 191 FIPHFPMFVMFLVSILAETNRAPFDLPEAEAELVSGYNVEYSAMPFALFFLGEYGNMILM 250

Query: 220 LWLFMALFLG 229
             +   LFLG
Sbjct: 251 SGITAILFLG 260