Pairwise Alignments

Query, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 323 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.2 bits (160), Expect = 9e-16
 Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 28/298 (9%)

Query: 9   LYAFLVGGILLGFHRKLMARVQCRPGPPIIQYLIHTFKFYFKELTFPISAGNPLYVFVAL 68
           ++A  +G  L GF R++ AR+Q R G P++Q      K   K    P +A   +++ V L
Sbjct: 22  IFAITLGLALKGFDRRVFARLQRRVGAPLLQPFYDVLKLMTKRTLVPENANLVVFLMVPL 81

Query: 69  MDVM---VWMSALSIAVVFESS-----LLILIGLYILQKIVEHGCGLSSGSPYGKVGGVR 120
           + +    V  + + I  +++ S     LL+L  L  +  ++    G +SGSP+G +G  R
Sbjct: 82  LGLASMGVAAAMIPIPGLYDPSPAFGDLLVLFYLLSVPAVMLMLAGSASGSPFGGIGFSR 141

Query: 121 SV-FSAAAEIPLFAAAGIVYTVTHS-------LIIGDIINYQAVNGPLIFQ--LPICAFA 170
            +    A E P+      V   T +       L + +I+ YQ  +G  +F   +      
Sbjct: 142 EMAIMLAYEGPILLVIVSVALKTGAALGQPICLSLSEIVRYQQAHGAYLFDPWMWPAVLT 201

Query: 171 VFVLVLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAWFVLLWLFMALFL- 228
               + +    SPF I + + +++ G L E+ G    ++ +  A+   V++ L + LF  
Sbjct: 202 YIAFIPANLGISPFDIPEAESEVLEGPLIEYSGVALGLLKLTSAVKSVVVIGLGIVLFFP 261

Query: 229 -GPLIVASPVLTLLGMFVLTII-ISFICALTPLLAPNHSVMLQIT------IASLTLI 278
            GP  +   V+  L   V+T+  +S + A    +  + +V+  +       IASL L+
Sbjct: 262 NGPEGLFGLVVFALKCLVITVCGVSVLRAAVGRMRIDQAVIFYLKWPELLGIASLALV 319