Pairwise Alignments

Query, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 345 a.a., NADH-quinone oxidoreductase subunit H from Phaeobacter inhibens DSM 17395

 Score = 59.7 bits (143), Expect = 9e-14
 Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 32/285 (11%)

Query: 8   ALYAFLVGGILLGFH--RKLMARVQCRPGPPII------QYLIHTFKFYFKELTFPISAG 59
           A+ AF++  +L   +  RK+ A VQ R GP ++      Q +    K+  KE+  P  A 
Sbjct: 21  AVVAFVMISLLFLVYGDRKIWAAVQMRRGPNVVGVYGLLQSVADALKYVVKEVVIPAGAD 80

Query: 60  NPLYVFVALMDVMVWMSALSIAVVFESSLLILIGLYIL-----QKIVEHGC---GLSSGS 111
             +++   L   ++ M A ++    +  +L  I + IL       +  +G    G +S S
Sbjct: 81  RTVFILAPLTSFVLAMIAWAVIPFNDGWVLSDINVAILYVFAVSSLEVYGVIMGGWASNS 140

Query: 112 PYGKVGGVRSVFSAAAEIPLFAAAGIVYT----VTHSLIIGDIINYQ-----AVNGPLIF 162
            Y  +G +RS   AA  I    + G++       T S+  GDI+  Q      +N   I 
Sbjct: 141 KYPFLGSLRS---AAQMISYEVSIGLIIVGVIISTGSMNFGDIVRAQDGDLGLLNWYWIP 197

Query: 163 QLPICAFAVFVLVLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAWFVLLW 221
             P+  F  F+  L++    PF + + + ++++GY  E+      + M G+ IA F++  
Sbjct: 198 HFPM-VFLFFISALAETNRPPFDLPEAESELVAGYQVEYSATPFLLFMAGEYIAIFLMCA 256

Query: 222 LFMALFLGPLIVASPVLT--LLGMFVLTIIISFICALTPLLAPNH 264
           L   LF G  +   P L   +L M        F+ A+   + P +
Sbjct: 257 LTTLLFFGGWLSPIPGLPDGVLWMVAKMAFFFFLFAMVKAITPRY 301