Pairwise Alignments

Query, 220 a.a., membrane protein from Methanococcus maripaludis S2

Subject, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis JJ

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 40  IVYFTKPEKQLEAQVHEFGDKFNYVTV--EELKIRRFMSVVC-GIATAFSM-LTGDLFDF 95
           I YF  P KQL   V         +T   E+     F++++  G+A+  ++ +  DLF+ 
Sbjct: 66  ISYFYTPVKQLIITVIMLIGSLVLITGLGEKKSSGLFVALMLMGLASVSAVVMADDLFNI 125

Query: 96  ALFLAVIGISNIGIVAAVKKEWVLNAAFHYGLITIVSSLPLFGAAALILGKTGTLSI--- 152
            +F  +  I+  G+V A   E    +AF Y ++   +   L    +++L  TGTL+I   
Sbjct: 126 YVFYEIAAIAQTGLVIASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAATGTLNITDM 185

Query: 153 --FELAKNGNELFYQKLL-YAVGMIGETGVAPFYAAKAEMFRAPGAPYI-LMIHLSSLLV 208
             F L        Y  LL   +G+   +G+ PF+  KA+++ A   PYI  M+   S  V
Sbjct: 186 HNFLLNNPATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIY-ARAKPYIAAMLQTYSKFV 244

Query: 209 IVRTVEILLTI 219
           +V  + ++  +
Sbjct: 245 LVALLLVIFKL 255