Pairwise Alignments

Query, 369 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 363 a.a., GTP-dependent nucleic acid-binding protein EngD (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 80/359 (22%), Positives = 145/359 (40%), Gaps = 74/359 (20%)

Query: 68  VGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKI---------------- 111
           VG P+VGKSTL N LT A  E   + F T+    G++     ++                
Sbjct: 8   VGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDELAAIVKPERVIPTS 67

Query: 112 -QVLDAPGIISGASFGRGRGSEVLAAVRNVDLVMLVVDVFSPEHI--------PILEKEL 162
            + +D  G+++GAS G G G++ LA +R  + +  VV  F  E+I        P  + E+
Sbjct: 68  MEFVDIAGLVAGASKGEGLGNKFLANIRETEAIGHVVRCFENENIVHVANRVDPAGDIEV 127

Query: 163 GNVGIRL----DQEKPDVKIEKHDRGGLAINKTVNLTKIDEGTITAIVGEHRIHNAAILI 218
            N  + L      E+  V+ +K  +GG   +K           +  ++ E ++  +  L 
Sbjct: 128 INTELALADLDSVERAIVRQQKRAKGG---DKEAKFEVDVLEKLRPVLDEGKMLRSLELS 184

Query: 219 REDIDADQLIDVVLDSRSYIPTLVIVNKIDLADEEN---------LKKTEAAIGDRPHVF 269
           +E++ A   ++++    +  PT+ I N  +   E N           K  A +       
Sbjct: 185 KEELAAVAYLNLL----TLKPTMYIANVSEDGFENNPHLDAVRAIAAKENAVVVPVCAAI 240

Query: 270 VSGHKEINLEELKDKIFETLG---------------FIKLYLKPQGGKADLEEPLIILKN 314
            S   E+++EE +D+    LG                + L      G  ++    + +  
Sbjct: 241 ESELAEMDIEE-RDEFMADLGLTEPGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVSV-G 298

Query: 315 STVEDVCNRLHRDFVKNFRYALVWG----------ESAKHPGQ-RV-GLDHVLKDGDIL 361
           ++      ++H DF + F  A V            + AK  G+ RV G  +++KDGD++
Sbjct: 299 ASAPQAAGKIHTDFERGFIRAQVISYEDFINFKGEQGAKEAGKMRVEGKTYIVKDGDVM 357