Pairwise Alignments

Query, 369 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 365 a.a., GTP-dependent nucleic acid-binding protein EngD from Phaeobacter inhibens DSM 17395

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 80/359 (22%), Positives = 139/359 (38%), Gaps = 66/359 (18%)

Query: 65  VAFVGFPSVGKSTLLNKLTN-ANSEVGAYAFTT-----------------LTIIPGLMEH 106
           +  VG P+VGKSTL N LT  A+++   + F T                 L  I G  + 
Sbjct: 5   MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAGSKQI 64

Query: 107 KGAKIQVLDAPGIISGASFGRGRGSEVLAAVRNVDLVMLVVDVFSPEHIPILEKELGNVG 166
              ++  +D  G++ GAS G G G++ LA +R  D +  V+  F    +  ++   G V 
Sbjct: 65  IPTRMTFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVD---GRVD 121

Query: 167 IRLDQEKPDVKIEKHDRGGLAINKTVNLTKIDEGTITAIVGEHRIHNAAILIREDIDADQ 226
              D E  + ++   D   +   +  NL +  +G       + R+   A  + E+    +
Sbjct: 122 PVADAEVIETELMLSDLESIE-KRRANLVRKLKGNDKEAQQQDRLLADAQAMLEEGKPAR 180

Query: 227 LIDV---------VLDSRSYIPTLVIVNKIDL----ADEENLKKTEAAIGD-RPHVFVSG 272
           L++V         +L   +  P L + N  +      +E + K  E A G    HV +S 
Sbjct: 181 LVEVDAEDAKAWKMLQLLTTKPVLYVCNVGESESVEGNEYSAKVAEMAAGQGNSHVIISA 240

Query: 273 HKEINLEELKDKIFETL-----------------GFIKLYLKPQGGKADLEEPLIILKNS 315
             E  + +L+ +  E                   G+  L+L+        E     ++  
Sbjct: 241 QIEEEISQLEPEEAEMFLSEMGLAEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIRTG 300

Query: 316 T-VEDVCNRLHRDFVKNFRYA--LVWGESAKHPGQR----------VGLDHVLKDGDIL 361
           T        +H DF K F  A  + + +   H G++           G  +V+KDGD+L
Sbjct: 301 TAAPQAAGVIHGDFEKGFIRAETIAYEDFIAHNGEQGAKEAGKMRAEGKGYVVKDGDVL 359