Pairwise Alignments

Query, 369 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 363 a.a., GTP-dependent nucleic acid-binding protein EngD (RefSeq) from Shewanella sp. ANA-3

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 36/216 (16%)

Query: 68  VGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVL------------- 114
           VG P+VGKSTL N LT A  E   + F T+    G++     ++  L             
Sbjct: 8   VGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLPTT 67

Query: 115 ----DAPGIISGASFGRGRGSEVLAAVRNVDLVMLVVDVFSPEHI--------PILEKEL 162
               D  G+++GAS G G G++ LA +R  D +  VV  F  ++I        P  + E+
Sbjct: 68  MEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANRVDPARDIEV 127

Query: 163 GNVGIRL----DQEKPDVKIEKHDRGGLAINKTVNLTKIDEGTITAIVGEHRIHNAAILI 218
            N  + L      E+  ++ +K  +GG   +K           +  I+ E  +  +  L 
Sbjct: 128 INTELALADLDSLERAVIRQQKRAKGG---DKDAKFEVDVLEKMRPILDEGHMLRSMELS 184

Query: 219 REDIDADQLIDVVLDSRSYIPTLVIVNKIDLADEEN 254
           +E+++A   ++ +    +  PT+ I N  +   E N
Sbjct: 185 KEELEAVAYLNFL----TLKPTMYIANVAEDGFENN 216