Pairwise Alignments

Query, 478 a.a., TrkH family potassium uptake protein from Methanococcus maripaludis S2

Subject, 480 a.a., potassium uptake protein TrkH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (427), Expect = 2e-46
 Identities = 135/469 (28%), Positives = 236/469 (50%), Gaps = 36/469 (7%)

Query: 16  LGILISTIGFIMLLPSFIGIYF-HEPFFYFLFPSLFFMILGLLI--NKITKPISVKLKHA 72
           LG+ +S +   M  P  + +    E    F+  +L   I   L   N  +K I++ ++  
Sbjct: 11  LGLFLSMLTAFMFAPMLVAVVNGEETVGSFMLSALATGICASLCLHNGQSKGINLNIRDM 70

Query: 73  MVISALAWLMASLIGAIPF--YIGIEYFSYLDGVFESMSAWTTTGFSIVGDVESLPRTLQ 130
            ++++L WL+ SL  A+PF  Y GI    Y D  FE+MS  TTTG +++  ++++  ++ 
Sbjct: 71  FLLTSLTWLIVSLFAAMPFTLYHGI---GYTDAFFETMSGITTTGSTVLVGLDTMDHSIL 127

Query: 131 FWRSFEQWIGGVGVLAMVITILS--KAGASAYYRAEARE--EKIMPSTIGTIKKIWQIYL 186
            WRS  QW+GG+G + M + IL     G    +R E+ +  +K +P T    K ++ IY+
Sbjct: 128 IWRSLLQWLGGIGFIVMAVAILPFLNVGGMRLFRTESSDWSDKAVPRTQSMAKHLFFIYI 187

Query: 187 LYTTIGICLLYLSGLNLWSALNICMCGISTGGMSISNQSF-PFNNFAKIIMTLIMYIGGV 245
           L T I     +L+G+  + A+N  M  +STGG S S+ S   F+N A  +  + M  GG 
Sbjct: 188 LLTIICSVAYHLAGMTWFQAINHAMTTLSTGGYSTSDSSMAAFSNSAHWVGVVFMAAGG- 246

Query: 246 VSFSVHHNVLTGRRV---DDIQTKTSIPILFFAA----FVITLTSGIDPLDSL----FTV 294
           +   +   ++  R V   +D Q K  +  L F +    F +  T  I  +D+L    F V
Sbjct: 247 LPLLMFVQMIQQRDVKVWNDAQVKGFLFFLTFVSCSIGFWLWQTRDIALIDALRLSSFNV 306

Query: 295 VSAMTSTGFSSVQISSLTNISIAVLIFVMAIGGATGTTTGGIKLIRLVIMAKGFYYRLKE 354
           VS +T+TG+      +    +    +F+M +G  +G+T+GGIK+ R  I       +LK+
Sbjct: 307 VSVVTTTGYGLTDYGAWGAFANIAFLFLMFVGSCSGSTSGGIKIFRFQIAGAIMREQLKQ 366

Query: 355 VVSPGNAIIYKKIGKNQLSDFLI--LDAFIIAFAYIIHYLFGTLVLISLGYDPFLSVFES 412
              P N I  ++     +++ ++  L  F++ + ++I  L  +++L+  G DP  S   +
Sbjct: 367 QCHP-NGIFRERYNNRLITEDIVRSLITFVLLYMFVIVGL--SVILVLTGLDPVTSFTGA 423

Query: 413 VSLVANMGLSV-----DIVNHSLHP-IAKILGVFSMWVGRLEIIPIYVL 455
           ++ V+N+G  +      + N S  P +AK      M +GRLEI+ + VL
Sbjct: 424 ITAVSNVGPGLGPIIGPVGNFSTLPDLAKWALSLGMLLGRLEILTVAVL 472