Pairwise Alignments

Query, 478 a.a., TrkH family potassium uptake protein from Methanococcus maripaludis S2

Subject, 486 a.a., potassium uptake protein TrkH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  173 bits (439), Expect = 1e-47
 Identities = 136/475 (28%), Positives = 226/475 (47%), Gaps = 33/475 (6%)

Query: 12  IFHELGILISTIGFIMLLPSFIGIYFHE----PFFYFLFPSLFFMILGLLINKITKPISV 67
           I   +G+LI      ML P+ I I++++     F    F SLF        ++  K   +
Sbjct: 6   IIRIIGLLIGLFSITMLPPALIAIWYNDGGGTAFIQAFFVSLFIGFWLWYPHRRCKE-EL 64

Query: 68  KLKHAMVISALAWLMASLIGAIPFYIGIEY-FSYLDGVFESMSAWTTTGFSIVGDVESLP 126
           + +   +I  L W +   IGA+PF    +   S+ D  FES SA TTTG +++  ++SLP
Sbjct: 65  RTREGFLIVVLFWTVLGSIGALPFIFSSQPDLSWTDSFFESFSALTTTGATVIVGLDSLP 124

Query: 127 RTLQFWRSFEQWIGGVGVLAMVITILSKAGASA--YYRAE----AREEKIMPSTIGTIKK 180
           + + F+R   QW+GG+G++ + + IL   G      YRAE     ++ K+ P    T K 
Sbjct: 125 KAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRIAETAKA 184

Query: 181 IWQIYLLYTTIGICLLYLSGLNLWSALNICMCGISTGGMSISNQSFPFNNFAKIIMTLIM 240
           +W IYLL T       +L+G++++ A+      I+ GG S  + S  + N   I +  + 
Sbjct: 185 LWYIYLLLTISCAGAYWLAGMSMFDAICHSFSTIAIGGFSTHDASMGYFNSPVINLICVF 244

Query: 241 Y-IGGVVSFSVHHNVLTGRRVD--------DIQTKTSIPILFFAAFVITLTSGIDPLD-- 289
           + I   V+FSVH    + R ++        + +   +I +L  A    TL    D  D  
Sbjct: 245 FLIVSAVNFSVHFAAFSWRGINLKVYFRDTEFKVLVAIQLLLTAICFFTLYFYSDIYDTP 304

Query: 290 ------SLFTVVSAMTSTGFSSVQISSLTNISIAVLIFVMAIGGATGTTTGGIKLIRLVI 343
                 +LF  VS  T+TGF +   +        +L+F   IGG  G+T GGIK+IR+++
Sbjct: 305 EETLNHALFQAVSIATTTGFGTDSFNMWPLFLPMLLMFSSFIGGCGGSTAGGIKVIRVIL 364

Query: 344 MAKGFYYRLKEVVSPGNAIIYKKIGKNQLSDFLILDAFIIAFAYIIHYLFGTLVLISLGY 403
           +       LK +V P  A+   +IG   L D ++   +    AY + ++   L L+++G 
Sbjct: 365 LLLQGSRELKRLVHP-KAMFSIRIGSKALPDRIVDAVWGFFSAYALVFVLCMLALMAMGL 423

Query: 404 DPFLSVFESVSLVANMGLSVDIVNHSLHPI---AKILGVFSMWVGRLEIIPIYVL 455
           D   S   + + + N+G  +  V  +   I   AK + V +M  GRLEI  + +L
Sbjct: 424 DDITSFSATAACLNNLGPGLGEVASNYASIGDGAKWVLVVAMLFGRLEIFTLLIL 478