Pairwise Alignments

Query, 852 a.a., membrane protein from Methanococcus maripaludis S2

Subject, 852 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 1642 bits (4251), Expect = 0.0
 Identities = 821/852 (96%), Positives = 840/852 (98%)

Query: 1   MGEFLNKVSDFFKKNEKIKIILILLFIGMMSFQIRAQTADMAFTDNSYLQDMFSDDNGRM 60
           MGEFLNKVSDFFKKNEKIKIILILLFIGMMSFQIRAQTADMAFTDNSYLQDMFSDDNGRM
Sbjct: 1   MGEFLNKVSDFFKKNEKIKIILILLFIGMMSFQIRAQTADMAFTDNSYLQDMFSDDNGRM 60

Query: 61  YLTALDPYYYLRMTENYVNNDYSNVGETTVGIDGENIPYDTIQYAPPGREAGLVSALSIA 120
           YLTALDPYYYLRMTENYVN+DYS+VGETTV I+GENIPYDTIQYAPPG ++G VSALSIA
Sbjct: 61  YLTALDPYYYLRMTENYVNSDYSHVGETTVEINGENIPYDTIQYAPPGHKSGSVSALSIA 120

Query: 121 TVLVYSVWNSIDSTVTIMNAAFWVPAIMSIFLGIPVFFIVRRNTASNIGGLVGALLLISS 180
           TVLVYSVWNSIDSTVTIMNAAFWVPAIMSIFLGIPVFFIVRRNT SNIGGLVGALLLISS
Sbjct: 121 TVLVYSVWNSIDSTVTIMNAAFWVPAIMSIFLGIPVFFIVRRNTGSNIGGLVGALLLISS 180

Query: 181 PSLLYKTSAGFSDTPIFEILPLLFIVWMIMEAIHEQENSKKSGIFGGIAAILIGLYPMMW 240
           PSLLYKTSAGFSDTPIFEILPLLFIVWM+MEAIHEQENSKKSGIFGGIAAILIGLYPMMW
Sbjct: 181 PSLLYKTSAGFSDTPIFEILPLLFIVWMVMEAIHEQENSKKSGIFGGIAAILIGLYPMMW 240

Query: 241 SGWWYAFDITAGFLVLYTAYEYLTKSKNLKNVITTSLITLVGGAILVSLSTGLSGFINWI 300
            GWWYAFDITAGFLVLY AYEYLTKSKNLKNVITTSLITLVGGAILVSLSTGLSGFIN I
Sbjct: 241 MGWWYAFDITAGFLVLYLAYEYLTKSKNLKNVITTSLITLVGGAILVSLSTGLSGFINGI 300

Query: 301 LSPIGFTVINEATKITGWPNVYMTVSELAIPTVTDIIENSVGNIWLLIAGISGILLSFVS 360
           LSPIGFT INEATKITGWPNVY TVSELAIPTVTDIIENSVGN+WLLIAGISGILLSFVS
Sbjct: 301 LSPIGFTAINEATKITGWPNVYTTVSELAIPTVTDIIENSVGNVWLLIAGISGILLSFVS 360

Query: 361 FKHDKQKIDIKYALYLTLWLIATVYAATKGIRFVALMTPALAIGIGIFAGQIENIIKRYE 420
           F+HDKQKIDIKYALYLTLWL+ATVYAATKGIRFVALMTPALAIGIGIFAGQIENIIKRYE
Sbjct: 361 FRHDKQKIDIKYALYLTLWLMATVYAATKGIRFVALMTPALAIGIGIFAGQIENIIKRYE 420

Query: 421 KKVEYILYPVIGILSVITLIKYGGELFNILVPTTYVPIAVYLSIIALLVLAVYKIIDIIS 480
           KKVEYILYPVIGILSVI+LIKY GELFNI++PTTYVPIA YLSIIA+LVLAVYKIIDIIS
Sbjct: 421 KKVEYILYPVIGILSVISLIKYNGELFNIIIPTTYVPIAFYLSIIAMLVLAVYKIIDIIS 480

Query: 481 EKEQAVKKVFGILLAFMLVFPSMAAAVPFYTAPTMNNGWMDSLSWIKSETPENSVVTCWW 540
           EKEQAVKKVFG+LLA MLVFPSMAAAVPFYTAPTMNNGWMDSLSWIKSETPENSVVTCWW
Sbjct: 481 EKEQAVKKVFGVLLAVMLVFPSMAAAVPFYTAPTMNNGWMDSLSWIKSETPENSVVTCWW 540

Query: 541 DNGHIYTWATRKMVTFDGGSQNTPRAYWVGHAFSTSDENLSVGILRMLATSGDSAYDDDS 600
           DNGHIYTWATRKMVTFDGGSQNTPRAYWVGHAFSTSDENLSVGILRMLATSGDSAYDDDS
Sbjct: 541 DNGHIYTWATRKMVTFDGGSQNTPRAYWVGHAFSTSDENLSVGILRMLATSGDSAYDDDS 600

Query: 601 ILIKKTGSIKDTVDILNKILPLTRTEAKASLVNNYDLTDAEAEEVLDLTHPKVTNPDYLI 660
           ILIKKTGSIKDTVDILN+ILPLTRTEAKASLVNNYDLT+AEAEEV+DLTHPKVTNPDYLI
Sbjct: 601 ILIKKTGSIKDTVDILNEILPLTRTEAKASLVNNYDLTNAEAEEVIDLTHPKVTNPDYLI 660

Query: 661 TYNRMTSIASVWSMFGNWNFSLPASTENSDREMGYYQQLGGSAQDINGTTVVYIPLQETD 720
           TYNRMTSIASVWSMFGNWNFSLPA+TENSDREMGYYQQLGGSAQD+NGTTVVYIPLQETD
Sbjct: 661 TYNRMTSIASVWSMFGNWNFSLPANTENSDREMGYYQQLGGSAQDVNGTTVVYIPLQETD 720

Query: 721 SYRVINILEITDSEIKSANAVIDSNNQTSMQSPNFHKLILKVNGNVYEQETNENGDYSEI 780
           SYRVINILEITDSEIKSANAVIDSNNQTSMQSPNFHKLILKVNGNVYEQETNENGDYSEI
Sbjct: 721 SYRVINILEITDSEIKSANAVIDSNNQTSMQSPNFHKLILKVNGNVYEQETNENGDYSEI 780

Query: 781 VRLEKLSDGTYQVYAWVSSKNLEDSIYTKLHFLDGYGLEKISLEKESVDPTSYGIQPGFK 840
           VRLEKLSDGTYQVYAWVSSKNLEDSIYTKLHFLDGYGLEKISLEKESVDPTSYGIQPGFK
Sbjct: 781 VRLEKLSDGTYQVYAWVSSKNLEDSIYTKLHFLDGYGLEKISLEKESVDPTSYGIQPGFK 840

Query: 841 VYSVDYGTDYLN 852
           VYSVDYGTDYLN
Sbjct: 841 VYSVDYGTDYLN 852