Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

Subject, 428 a.a., Preprotein translocase secY subunit (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 83/391 (21%), Positives = 157/391 (40%), Gaps = 61/391 (15%)

Query: 73  TLITLGIGPIVTAGIIMQLL--VGSELISLDLSKPMNRALFQGLQKLFGIALCFLEAL-M 129
           ++  LGI P ++A IIMQL+  V  +L  L       R       +   + L  ++A+ M
Sbjct: 61  SIFALGIMPYISASIIMQLMSAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIGM 120

Query: 130 FVGAGAFGALTPLMTA---VLVFQLALGAILIIYLDEIVSRYGIGSGIGLFIAAGVSQTI 186
            +G    G       +   V V     GA+ +++L E ++  G+G+GI + I AG+    
Sbjct: 121 SIGLAGQGVSFTADFSFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGI---- 176

Query: 187 FVGTFGAEGYLWKFFTAMTAGSLWTALEYILPILGTILVFLV--VVYVESIRVEIPLAHG 244
                G    + + F +   G +     + L  +G + V ++  VV++E  +  I + + 
Sbjct: 177 ---VAGLPRAIGQSFESARQGDINI---FALVAIGLLAVAIIGFVVFIERGQRRIAVHYA 230

Query: 245 R-------VKGAVGKYPIKFIYVSNLPVILAAALF---ANIQLWGMFLEKMGFPILGHYT 294
           +               P+K      +P I A+++    A++  W    E MG        
Sbjct: 231 KRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMG-------- 282

Query: 295 SGRAVDGLAYYFSTPYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDAKSMAKK 354
                      +      S     PL+ + ++  ++ FC     F+      + K +A+ 
Sbjct: 283 -----------WLQDISQSIAPGQPLNILLFSAGIIFFC-----FFYTALMFNPKDVAEN 326

Query: 355 LGNLDMAIKGFRKSQKSIEQRLKRYITPITVMGSAFV-------GFLAAAADFTGALGGG 407
           L      I G R  ++S  + +   +T +T+ G+ ++        FL  AA+    L GG
Sbjct: 327 LKKSGAFIPGIRPGEQS-ARYIDGVLTRLTMFGALYMTAVCLLPQFLVVAANVPFYL-GG 384

Query: 408 TGVLLTVSIVYRLYEQLVQEQLSELHPSIAK 438
           T +L+ V +V     Q+    +S  + S+ K
Sbjct: 385 TSLLIVVVVVMDFMSQVQSHLVSHQYESLMK 415