Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

Subject, 444 a.a., protein translocase subunit secY/sec61 alpha from Pseudomonas syringae pv. syringae B728a

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 86/390 (22%), Positives = 161/390 (41%), Gaps = 59/390 (15%)

Query: 73  TLITLGIGPIVTAGIIMQLL--VGSELISLDLSKPMNRALFQGLQKLFGIALCFLEAL-M 129
           ++  LGI P ++A IIMQL+  V  +L  L       R       +   + L  ++A+ M
Sbjct: 75  SIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIGM 134

Query: 130 FVGAGAFGA-----LTPLMTAVLVFQLALGAILIIYLDEIVSRYGIGSGIGLFIAAGVSQ 184
            VG  + G      L     AV  F    GA+ +++L E ++  G+G+GI + I AG+  
Sbjct: 135 SVGLASQGVAFSGDLGFHFVAVTTF--VAGAMFMMWLGEQITERGVGNGISMLIFAGI-- 190

Query: 185 TIFVGTFGAEGYLWKFFTAMTAGSLWTALEYILPILGTILVFLV--VVYVESIRVEIPLA 242
                  G    + + F +   G +     + L  +G + V ++  VV++E  +  I + 
Sbjct: 191 -----VAGLPRAIGQSFESARQGDINI---FALVAIGLLAVAIIGFVVFIERGQRRIAVH 242

Query: 243 HGR-------VKGAVGKYPIKFIYVSNLPVILAAALFANIQLWGMFLEKMGFPILGHYTS 295
           + +               P+K      +P I A+++               FP       
Sbjct: 243 YAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILL-------------FPASLGSWF 289

Query: 296 GRAVDGLAYYFSTPYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDAKSMAKKL 355
           G++ +GL +       I+     PL+ + ++  ++ FC     F+      + K +A+ L
Sbjct: 290 GQS-EGLGWLQDISQSIA--PGQPLNILLFSAGIIFFC-----FFYTALMFNPKDVAENL 341

Query: 356 GNLDMAIKGFRKSQKSIEQRLKRYITPITVMGSAFV-------GFLAAAADFTGALGGGT 408
                 I G R  ++S  + +   +T +T+ G+ ++        FL  AA+    L GGT
Sbjct: 342 KKSGAFIPGIRPGEQS-ARYIDGVLTRLTMFGALYMTAVCLLPQFLVVAANVPFYL-GGT 399

Query: 409 GVLLTVSIVYRLYEQLVQEQLSELHPSIAK 438
            +L+ V +V     Q+    +S  + S+ K
Sbjct: 400 SLLIVVVVVMDFMSQVQSHLVSHQYESLMK 429