Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

Subject, 439 a.a., preprotein translocase subunit SecY from Synechococcus elongatus PCC 7942

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 94/438 (21%), Positives = 182/438 (41%), Gaps = 75/438 (17%)

Query: 25  ISFKEKLQWTALVLVLYFILGTIDIYTGGSEMPAIFDFWQTVTASKMGTLITLGIGPIVT 84
           ++F   LQ  A    L  ++G +DI++GG               S +G +  LGI P + 
Sbjct: 52  VAFSNDLQGNAN---LGGVIGFLDIFSGGG-------------LSALG-VFALGILPYIN 94

Query: 85  AGIIMQLLVGSELISLDLSK---PMNRALFQGLQKLFGIALCFLEALMFVGAGAFGALTP 141
           A II+QLL  +     DL K      R     L +   +    L++++        A+TP
Sbjct: 95  ASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQSIVIAVWVTRYAVTP 154

Query: 142 --LMTAVLVFQLALGAILIIYLDEIVSRYGIGSGIGLFIAAGVSQTIFVGTFGAEGYLWK 199
             L T      L  G++ ++++ E+++  GIG+G  L I   +  T+          L +
Sbjct: 155 GPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATL-------PRSLQQ 207

Query: 200 FFTAMTAGSLWTALEYILPILGTILVFLVVVYVESIRVEIPLAHGRVKGAVGKY------ 253
                 +G   T    ++ ++  +   + +V+V+     IP+   R +     Y      
Sbjct: 208 TLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVGNRVYSERSSY 267

Query: 254 -PIKFIYVSNLPVILAAALFANIQLWGMFLEKMGFPILGHYTSGRAVDGLAYYFS----T 308
            P++      +P+I A+A+             + F  L ++TS   V  +A Y S    T
Sbjct: 268 LPLRLNQGGVMPIIFASAILV-----------LPFS-LANFTSNEVVLRIANYLSPNGPT 315

Query: 309 PYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKS 368
           P+         ++A+FY V++V F      ++  +  L+   +A+ L  +  +I G R  
Sbjct: 316 PW---------IYALFYLVLIVAFS-----YFYSSLILNPVDLAQNLKKMGSSIPGVRPG 361

Query: 369 QKSIEQRLKRYITPITVMGSAFVGFLA--------AAADFTGALGGGTGVLLTVSIVYRL 420
            ++  Q ++  +  +T++G+ F+G +A        A    T    G T +L+ V +    
Sbjct: 362 -RATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGFGATSLLILVGVAIDT 420

Query: 421 YEQLVQEQLSELHPSIAK 438
            +Q+    +S+ +  + K
Sbjct: 421 AKQVQTYVISQRYEGMVK 438