Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

Subject, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella loihica PV-4

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 94/422 (22%), Positives = 170/422 (40%), Gaps = 75/422 (17%)

Query: 43  ILGTIDIYTGGSEMPAIFDFWQTVTASKMGTLITLGIGPIVTAGIIMQLL--VGSELISL 100
           ILG  ++++GG              A +  ++  LGI P ++A IIMQLL  V   L  L
Sbjct: 59  ILGMFNMFSGG--------------ALERASIFALGIMPYISASIIMQLLTVVHPALAEL 104

Query: 101 DLSKPMNRALFQGLQKLFGIALCFLEALMFVGAGAFGALTPLMTA--------VLVFQLA 152
                  R       +   + L   +A+    A     L P +          V V  L 
Sbjct: 105 KKEGESGRKKISQYTRYGTLVLGTFQAIGI--ATGLPNLVPGLVVNLGFGFYFVAVVSLV 162

Query: 153 LGAILIIYLDEIVSRYGIGSGIGLFIAAGVSQTIFVGTFGAEGYLWKFFTAMTAGSLWTA 212
            G + +++L E ++  GIG+GI + I AG    I  G   A G      TA  A      
Sbjct: 163 TGTMFLMWLGEQITERGIGNGISILIFAG----IVAGLPSAIGQ-----TAEQARQ--GD 211

Query: 213 LEYILPILGTILVFLV---VVYVESIRVEIPLAHG------RVKGAVGKY-PIKFIYVSN 262
           L  ++ +L  ++VF V   VV+VE  +  I + +       +V  A   + P+K      
Sbjct: 212 LNVLVLLLIAVIVFAVTYFVVFVERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKVNMAGV 271

Query: 263 LPVILAAALFANIQLWGMFLEKMGFPILGHYTSGRAVDGLAYYFSTPYGISSLTADPLHA 322
           +P I A+++   I   G   +  G             +GL++   + + ++     PL++
Sbjct: 272 IPPIFASSI---ILFPGTLAQWFG-----------QNEGLSWL--SDFSLAVSPGQPLYS 315

Query: 323 VFYTVMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYITP 382
           + Y   ++ FC     F+      + +  A  L      I G R  +++  + + + +T 
Sbjct: 316 LLYATAIIFFC-----FFYTALVFNPRETADNLKKSGAFIPGIRPGEQT-SRYIDKVMTR 369

Query: 383 ITVMGSAFVGFLAAAADF------TGALGGGTGVLLTVSIVYRLYEQLVQEQLSELHPSI 436
           +T+ G+ ++ F+    +F           GGT +L+ V ++     Q+    +S  + S+
Sbjct: 370 LTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQVQTHMMSHQYESV 429

Query: 437 AK 438
            K
Sbjct: 430 MK 431