Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

Subject, 437 a.a., preprotein translocase, SecY subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 104/454 (22%), Positives = 188/454 (41%), Gaps = 87/454 (19%)

Query: 28  KEKLQWTALVLVLYFILGTIDIYTGGSEMPAIFDFWQTVTASKMG-------------TL 74
           + KL WT L+L  Y I   + +   G +  A+ DF+ +V  +  G             ++
Sbjct: 16  RSKLMWTFLLLAAYRI--GVHVPIPGVDSSALADFFASVQNTLFGLFDMFSGGGLRNLSV 73

Query: 75  ITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLF--------------GI 120
             LGI P ++A II+QLL   +++S DL +        G +KL               G+
Sbjct: 74  FALGIMPYISASIILQLL---QVVSPDLKRLAKEEGAAGKRKLTQYTRYATVLITVIQGL 130

Query: 121 ALCFLEALMFVGAGAFGALTP--LMTAVLVFQLALGAILIIYLDEIVSRYGIGSGIGLFI 178
            +      M   AGA   L        V +  L  G +LI++L E ++  G+G+GI L I
Sbjct: 131 GIAIGLESMHSPAGAPVVLEAGWAFRLVTIITLTAGTVLIMWLGEQITEKGLGNGISLII 190

Query: 179 AAGVSQTIFVGTFGAEGYLWKFFTAMTAG--SLWTALEYILPILGTILVFLVVVYVESIR 236
            +G+         G  G + K    ++AG  SL+ A+  IL ++G  LV   +V+VE  +
Sbjct: 191 FSGI-------VAGIPGGILKSAQLISAGDMSLFAAI-VILALMG--LVLAGIVFVERAQ 240

Query: 237 VEIPLAHGRVK-------GAVGKYPIKFIYVSNLPVILAAALFANIQLWGMFLEKMGFP- 288
             IP+ + + +       G     P++      +P I A++L               FP 
Sbjct: 241 RRIPIHYAKRQVGRKMFGGQTTHLPLRVNTAGVIPPIFASSLLL-------------FPA 287

Query: 289 ILGHYTSGRAVDGLAYYFSTPYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDA 348
            + ++ +   +  +A +FS             H + Y ++ +   + F  F+      D 
Sbjct: 288 TVANFATSDWLKSVASWFSP------------HTIPYNILFIALIVFFSFFYTAII-FDP 334

Query: 349 KSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYITPITVMGSAFVGFLAAAADFTGA----- 403
           K +A+ L      I G R   K+ ++ + + +T IT+ G+ ++  ++    F  A     
Sbjct: 335 KDIAENLKKGGGFIPGIRPGDKT-KEYIDKVLTRITLWGAIYISVISVLPMFLIAQFNVP 393

Query: 404 -LGGGTGVLLTVSIVYRLYEQLVQEQLSELHPSI 436
              GGT +L+ V +      Q+    +S  +  +
Sbjct: 394 FYFGGTSLLILVGVAMDFMSQIESHLISRQYEGL 427