Pairwise Alignments

Query, 225 a.a., 30S ribosomal protein S5 from Methanococcus maripaludis S2

Subject, 167 a.a., 30S ribosomal protein S5 from Vibrio cholerae E7946 ATCC 55056

 Score = 87.4 bits (215), Expect = 1e-22
 Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 11/146 (7%)

Query: 56  DLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKL 115
           DL+E+++ V  V +  K GR   + A  VVG+ NG VG G GK++EV  AI+KA+  A+ 
Sbjct: 11  DLQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARR 70

Query: 116 SLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAG 175
           S++ + +  G          ++    KG     KV + PA  G G++AG   +AVL +AG
Sbjct: 71  SMVTIALNEG----------TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAG 120

Query: 176 VKDAWTKTFGDTRTTYNFAEATFDAL 201
           V +  +K +G T    N   AT DAL
Sbjct: 121 VHNVLSKAYGST-NPINIVRATIDAL 145