Pairwise Alignments

Query, 225 a.a., 30S ribosomal protein S5 from Methanococcus maripaludis S2

Subject, 188 a.a., 30S ribosomal protein S5 from Phaeobacter inhibens DSM 17395

 Score = 90.1 bits (222), Expect = 3e-23
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 10/162 (6%)

Query: 55  PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAK 114
           P+  ++++ +  V +  K G+R  + A VVVG++ G VG G GK+KEV  AIRKA   AK
Sbjct: 18  PEFADRLVAINRVSKTVKGGKRFGFAALVVVGDQKGRVGFGKGKAKEVPEAIRKATEQAK 77

Query: 115 LSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLA 174
             +I+V++  G          ++     G  G+ KV +  AP G G++AG   +AV  + 
Sbjct: 78  RQMIRVQLKEG---------RTLHHDMHGRHGAGKVVMRTAPEGTGIIAGGPMRAVFEML 128

Query: 175 GVKDAWTKTFGDTRTTYNFAEATFDALNNLNFVRCLPNQKEK 216
           GVKD  +K+ G ++  YN   AT D L      R +  ++ K
Sbjct: 129 GVKDVVSKSIG-SQNPYNMIRATMDGLKKEQSPRSVAQRRGK 169