Pairwise Alignments

Query, 225 a.a., 30S ribosomal protein S5 from Methanococcus maripaludis S2

Subject, 167 a.a., 30S ribosomal protein S5 (RefSeq) from Shewanella loihica PV-4

 Score = 84.7 bits (208), Expect = 9e-22
 Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 11/146 (7%)

Query: 56  DLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKL 115
           DL+E+++ V  V ++ K GR   + A  VVG+ NG VG G GK++EV  AI+KA+  A+ 
Sbjct: 11  DLQEKLVAVNRVSKVVKGGRIFSFTALTVVGDGNGKVGYGYGKAREVPAAIQKAMEKARR 70

Query: 116 SLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAG 175
           +++ V +  G          ++    KG     +V + PA  G G++AG   +AVL +AG
Sbjct: 71  NIVSVELVNG----------TLHHPVKGRHTGSRVYMQPASEGTGIIAGGAMRAVLEVAG 120

Query: 176 VKDAWTKTFGDTRTTYNFAEATFDAL 201
           V +  +K +G T    N   AT DAL
Sbjct: 121 VHNVLSKAYGST-NPINIVRATVDAL 145