Pairwise Alignments

Query, 182 a.a., 50S ribosomal protein L6 from Methanococcus maripaludis S2

Subject, 177 a.a., 50S ribosomal protein L6 from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 3e-17
 Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 3   VAALIREEIEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEISTEDGKVVIECAFPRK 62
           ++ + +  + IP  V V++NG  + +K    EL R + + G+ I+ ED ++      PR+
Sbjct: 1   MSRVAKAPVAIPAGVEVKLNGQEITIKGAKGELTR-VFHNGVVIAQEDNQLTFG---PRE 56

Query: 63  AQT---AIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKGNTVMIDNFLGEKYT 119
                 A  GT R+ ++NM+ GVT+GF  KLV++   +  + + KGN V +   LG  + 
Sbjct: 57  GVANAWAQAGTARALVKNMVVGVTEGFTKKLVLKGVGY--RAAMKGNAVGLT--LGFSHP 112

Query: 120 RTAKIMDGVTVKV-SGEDVVVSGANKEFVGQTAANI 154
              ++  GV  +  S  ++V++G +K+ VGQ AA+I
Sbjct: 113 VEHELPAGVKAECPSQTEIVLTGCDKQVVGQVAADI 148



 Score = 27.3 bits (59), Expect = 2e-04
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 18/51 (35%)

Query: 127 GVTVKVSGEDVVVSGANKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
           GV VK++G+++ + GA                  KG  TR+F +G+ I ++
Sbjct: 14  GVEVKLNGQEITIKGA------------------KGELTRVFHNGVVIAQE 46