Pairwise Alignments

Query, 182 a.a., 50S ribosomal protein L6 from Methanococcus maripaludis S2

Subject, 177 a.a., 50S ribosomal protein L6 (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 3   VAALIREEIEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEISTEDGKVVIECAFPRK 62
           ++ + +  + IP  V V +NG  + VK G   L R ++   + ++ EDG +         
Sbjct: 1   MSRVAKAPVSIPAGVEVTLNGQEITVKGGKGTLTR-VINSAVAVTVEDGAIKFAPVEGVV 59

Query: 63  AQTAIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKGNTVMIDNFLGEKYTRTA 122
              A  GT R+ I NM+ GV+ GFE KL +    +  KV+       +D  LG  +    
Sbjct: 60  NAWAQAGTARALINNMVVGVSQGFEKKLQLVGVGYRAKVAGSD----VDLSLGFSHPLVH 115

Query: 123 KIMDGVTVKV-SGEDVVVSGANKEFVGQTAANI 154
           K+  GVT +  S  ++V+   +KE VGQ AA I
Sbjct: 116 KLPAGVTAECPSQTEIVLRSIDKELVGQVAAEI 148