Pairwise Alignments

Query, 182 a.a., 50S ribosomal protein L6 from Methanococcus maripaludis S2

Subject, 176 a.a., 50S ribosomal protein L6 (RefSeq) from Shewanella loihica PV-4

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 11/155 (7%)

Query: 3   VAALIREEIEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEISTEDGKVVIECAFPRK 62
           ++ + +  + IP  V V +N  T+ VK GAK     ++   + +  E+ +  I+C+ P +
Sbjct: 1   MSRVAKAPVAIPAGVEVTLNEQTITVK-GAKGSLTRVINADVSVVVENNE--IKCS-PAE 56

Query: 63  AQT--AIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKGNTVMIDNFLGEKYTR 120
             T  A  GT R+ I NM+ GV +GFE KL +    +  K++  G    ID  LG  +  
Sbjct: 57  GVTSAAQAGTARALINNMVVGVNEGFERKLTLVGVGYRAKIAGNG----IDLTLGFSHPL 112

Query: 121 TAKIMDGVTVKV-SGEDVVVSGANKEFVGQTAANI 154
             ++ DGVT +  S  ++V+   +K+ VGQ AA I
Sbjct: 113 VHQLPDGVTAECPSQTEIVLKSTDKQLVGQVAAEI 147