Pairwise Alignments

Query, 182 a.a., 50S ribosomal protein L6 from Methanococcus maripaludis S2

Subject, 177 a.a., ribosomal protein L6 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%)

Query: 3   VAALIREEIEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEISTEDGKVVIECAFPRK 62
           ++ + +  + IP  V V +N  T+ VK GAK     ++   + +  E+G +         
Sbjct: 1   MSRVAKAPVSIPAGVEVTLNEQTLTVK-GAKGSLTRVINNAVNVVIENGVIKFLPVEGAV 59

Query: 63  AQTAIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKGNTVMIDNFLGEKYTRTA 122
              A  GT R+ + NM+ GV+ GFE KL +    +  K+        ID  LG  +    
Sbjct: 60  GAWAQAGTTRALVNNMVVGVSQGFERKLKLVGVGYRAKLVGAD----IDLTLGFSHPLVH 115

Query: 123 KIMDGVTVKV-SGEDVVVSGANKEFVGQTAANI 154
           K+  GVT +  S  D+V+ G +K+ +GQ AA I
Sbjct: 116 KLPAGVTAECPSQTDIVLRGVDKQLIGQVAAEI 148