Pairwise Alignments

Query, 181 a.a., 50S ribosomal protein L5 from Methanococcus maripaludis S2

Subject, 180 a.a., LSU ribosomal protein L5p (L11e) from Xanthomonas campestris pv. campestris strain 8004

 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 11  PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELT---GQSPVRTLAKQTNPAFGIRKKLP 67
           PM+ P++ KVT+N GVGEA     I    + +++   GQ PV T ++ +  +F IR   P
Sbjct: 26  PMEVPKLVKVTLNMGVGEAATNKKILENAVADMSKISGQKPVVTKSRVSVASFKIRDGWP 85

Query: 68  IGLKVTLRGKKAEEFLK---NAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYD 124
           IG K TLR  K  EFL    N         + +   SFD  GNF+ GV E I FP   +D
Sbjct: 86  IGCKTTLRRAKMYEFLDRLINISLPRVRDFRGVSGRSFDGRGNFNMGVKEQIIFPEIDFD 145

Query: 125 PSVGIYGMDICVT 137
               I GMDI +T
Sbjct: 146 AVDAIRGMDIAIT 158