Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 228 a.a., ribosomal protein S3, bacterial type from Pseudomonas stutzeri RCH2

 Score = 96.7 bits (239), Expect = 3e-25
 Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 4/184 (2%)

Query: 4   RTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKE 63
           RT+    +++  + EY + KL  A  S ID  +     RIT+   +PG VIG+KG+ V++
Sbjct: 27  RTYADYLLADLNVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEK 86

Query: 64  LTETLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSG 123
           L + L  +  V    I ++++  P+LD  +V   +A  LER + FR+    A++  M  G
Sbjct: 87  LRQDLTKQMGVP-VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIG 145

Query: 124 AKGVAIIVSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIM 182
           AKG+ I VSG+L G E +RTE + +G +        A ++ +   A    G++GV V I 
Sbjct: 146 AKGIKIQVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTYEAHTTYGVIGVKVWIF 203

Query: 183 RPDV 186
           + +V
Sbjct: 204 KGEV 207