Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 244 a.a., 30S ribosomal protein S3 from Synechococcus elongatus PCC 7942

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 5/174 (2%)

Query: 16  IDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLAT--EYS 73
           I +Y +  L  AG + I  ++      + +   +PG V+GR G  +  L E L    + S
Sbjct: 39  IRDYVRKNLSNAGIADIRVERKADQVELEIRTARPGVVVGRGGAGIDTLREGLQALLKDS 98

Query: 74  VKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSG 133
            +  +I V +VE  D D A++G  IA  LER + FR+    AI+R   +G +G+ I V+G
Sbjct: 99  SRQIRINVIEVERVDADAALLGEYIAQQLERRVAFRRCVRQAIQRAQRAGVQGIKIQVAG 158

Query: 134 KLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDV 186
           +L+G E +RTE   +G +        A ++ ++  A    GI+G+ V + R ++
Sbjct: 159 RLNGAEIARTEWTREGRVPL--HTLRADIDYAYTTATTTYGILGIKVWVFRGEI 210