Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 230 a.a., 30S ribosomal protein S3 (RefSeq) from Shewanella amazonensis SB2B

 Score = 82.0 bits (201), Expect = 8e-21
 Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 12  SETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATE 71
           S+  + ++ + KL  A  S I  ++     R+T+   +PG VIG+KG+ V+ L   +A +
Sbjct: 35  SDWEVRKFLEKKLEAASVSKIVIERPAKSIRVTIHTARPGVVIGKKGEDVEVLRAEVA-K 93

Query: 72  YSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIV 131
            S    QI + ++  P+LD  +V   IA  LER + FR+    A++  M  GA+G+ + V
Sbjct: 94  ISGTPAQINIAEIRKPELDAKLVADSIAQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEV 153

Query: 132 SGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDV 186
           SG+L G E +RTE + +G +        A ++ +   +    G++G+ V + + +V
Sbjct: 154 SGRLGGAEIARTEWYREGRVPL--HTLRADIDYATSESHTTYGVIGIKVWVFKGEV 207