Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 243 a.a., 30S ribosomal protein S3 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 88.6 bits (218), Expect = 9e-23
 Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 4/192 (2%)

Query: 11  VSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLAT 70
           + ++ I +Y   +L +A  S I  ++T     ITV   +PG +IG+ G+ V +L E L  
Sbjct: 33  LEDSKIRKYLNARLAKASVSRIVIERTLKLVTITVCTARPGIIIGKGGQEVDKLKEELK- 91

Query: 71  EYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAII 130
           + + K+ QI + +V+ P+LD  +V + IA  +E  + +R+    AI   M  GA+G+ I 
Sbjct: 92  KVTDKDIQINIFEVKRPELDAVIVANNIARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQ 151

Query: 131 VSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDVSLP 189
           +SG+L+G E +R+E + +G  +       A ++  H  A  K+G++G+ V I R +V   
Sbjct: 152 ISGRLNGAEMARSEMYKEG--RTPLHTFRADIDYCHAEALTKVGLLGIKVWICRGEVFGK 209

Query: 190 DEIVISSGEIKE 201
            E+  +  + KE
Sbjct: 210 KELAPNFTQSKE 221