Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 230 a.a., 30S ribosomal protein S3 (RefSeq) from Shewanella sp. ANA-3

 Score = 82.4 bits (202), Expect = 6e-21
 Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 12  SETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATE 71
           S+  + +Y   KL  A  S I  ++     R+T+   +PG VIG+KG+ V E+     ++
Sbjct: 35  SDWEVRKYLADKLQAASVSKIVIERPAKSIRVTIHTARPGVVIGKKGEDV-EVLRAAVSK 93

Query: 72  YSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIV 131
            +    QI + ++  P+LD  +V   IA  LER + FR+    A++  M  GA+G+ + V
Sbjct: 94  LAGTPAQINIAEIRKPELDAKLVADSIAQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEV 153

Query: 132 SGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDV 186
           SG+L G E +R+E + +G +        A ++ S   +  + G++G+ V I + +V
Sbjct: 154 SGRLGGAEIARSEWYREGRVPL--HTLRADIDYSTSESHTQYGVIGIKVWIFKGEV 207