Pairwise Alignments

Query, 415 a.a., M20 family metallo-hydrolase from Methanococcus maripaludis S2

Subject, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.5 bits (171), Expect = 8e-17
 Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 28/331 (8%)

Query: 88  HMDIVPEGDLGLWNSDPFKAEIKDGIIYGRGSEDNHKGIVSSFLLLKMIFEEKIDPKYNL 147
           H D+VP GDL  W++ PF+  I DG +YGRG+ D    + +  +  +    +  +   ++
Sbjct: 75  HTDVVPTGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMVVATERFVAKHPNHPGSI 134

Query: 148 NLIFVADEEDGSKYGLSYLVNNFE---DEIFSSKDLIIVPDFGMPEGEFIEIAEKNILWL 204
             +  +DEE     G + +++  E   ++I  +  L+  P   +  G+ ++   +  L  
Sbjct: 135 AFLITSDEEGPFINGTTRVIDTLEARNEKI--TWALVGEPSSTLKLGDVVKNGRRGSLTA 192

Query: 205 KFKITGKQCHGSVPENGINADLIAFSFGKGLYDKLYGKYDGINPIFNPAFSTFEPTILKN 264
              + G Q H + P    N    A  F   L +     +D  N  F P  ++ +   +  
Sbjct: 193 NLTVKGVQGHVAYPHLADNPIHKAAPF---LAELSQTHWDNGNAFFPP--TSMQIANING 247

Query: 265 NIENINTIPGYVELNFDCRIIPKYDPKEVLSDIENYIEVFKNEIEKHILHFDISEKENIS 324
                N IPG +E+ F+ R        EV ++I   IE  +  +  H L +D      I 
Sbjct: 248 GTGASNVIPGALEVMFNFRY-----STEVTAEI--LIERVETLLTAHELDYD------IR 294

Query: 325 ITYEILKLEKAEETKKDSEVVKKLGSAIKNVLNKESVLCGMGGGTVAAFLREKGYNTAVW 384
            T+  L     E    D+        AI+ V   ++     GG +   F+   G      
Sbjct: 295 WTFNGLPFLTGEGPLLDA-----TRHAIRQVTGYDTDPQTTGGTSDGRFIAPTGAKVLEL 349

Query: 385 GIGDETAHQPNEHIKIENLIKMAEVYLDILK 415
           G  + T H+ NE +K+++L ++A  Y  IL+
Sbjct: 350 GPVNATIHKVNECVKVDDLEQLALCYEVILE 380