Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 557 a.a., DNA repair protein RecN from Pseudomonas fluorescens FW300-N2E2

 Score = 45.1 bits (105), Expect = 2e-08
 Identities = 62/316 (19%), Positives = 127/316 (40%), Gaps = 37/316 (11%)

Query: 886  EILKNKKERYEDLTKDLRELTEKKEAFEK--ELEILNGEKRRVYGRINQNESQ--INSLS 941
            ++L  + E  E+L     EL E ++  +     E L G  R+V  + ++++S   +N+L+
Sbjct: 188  QLLSYQLEELENLALGENELAELEQEHKNLTNAETLLGICRQVVEQCSESDSGNVLNALT 247

Query: 942  IDKAKYET------RLEEEDRKLYVCE-NIEQISEDITSKIKEFDVDALESHQIDLE--- 991
                +  +       L E    L   +  +E+   ++   +  FD D      ++     
Sbjct: 248  ASLNRLSSVNNSVGALNEATNLLTSAQIQVEEAVGELNRFLDHFDADPARLQYLEERLDT 307

Query: 992  ----GHIKKLEPVNM-----RAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEEVSKR 1042
                    +++P ++     R +++ + + +  DE  E+  D   E   Y    +E +K 
Sbjct: 308  IYTLARKHRIQPADVAELQQRLLEELETL-NANDESIERLGD---ELASYARHYQEKAKE 363

Query: 1043 KKEVFMDVYLKVAENYEKIYTEIG-GSGKLSLE---------NPEDPFSGGLLIDASPMN 1092
              E+       +A   E+    +G   G+ ++E          P       LL+ A+P  
Sbjct: 364  LSELRQHAATGLASAVEQEIQRLGMPGGRFTIELRPNAGDELQPNGLEQVELLVSANPGQ 423

Query: 1093 KKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASK 1152
                   V SGGE S  +LA        +  P  V DEVD  +    A ++G++++   +
Sbjct: 424  PLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRRLGE 483

Query: 1153 DSQFIVISHREQMISK 1168
              Q + ++H  Q+ ++
Sbjct: 484  RGQVLTVTHLPQVAAQ 499



 Score = 30.4 bits (67), Expect = 4e-04
 Identities = 45/246 (18%), Positives = 94/246 (38%), Gaps = 33/246 (13%)

Query: 231 ETHVKLTEELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDI 290
           +TH +L +E      +  +++++       +T++E++ L            E  A+   +
Sbjct: 140 DTHRRLLDEYAGATDL--ARQVQLAAQRWRQTRQELDRLSNSG-------DEQRARHQLL 190

Query: 291 RNRLQNLIN-ELNEKGNEEIMELHKSIKEMEVTVD---------------NDKKSLNGAL 334
             +L+ L N  L E    E+ + HK++   E  +                N   +L  +L
Sbjct: 191 SYQLEELENLALGENELAELEQEHKNLTNAETLLGICRQVVEQCSESDSGNVLNALTASL 250

Query: 335 DDLKNVNSQSEKKGQDLVETRQKIETIRTETLQKEAEINALKTEMENLETEKKKLKSKVE 394
           + L +VN+        +    +    + +  +Q E  +  L   +++ + +  +L+   E
Sbjct: 251 NRLSSVNNS-------VGALNEATNLLTSAQIQVEEAVGELNRFLDHFDADPARLQYLEE 303

Query: 395 ESETQTEILKQQERKLSERINESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQK 454
             +T    L ++ R     + E Q  L       NA +  I +    LA      +   K
Sbjct: 304 RLDT-IYTLARKHRIQPADVAELQQRLLEELETLNANDESIERLGDELASYARHYQEKAK 362

Query: 455 ELEEIR 460
           EL E+R
Sbjct: 363 ELSELR 368



 Score = 26.9 bits (58), Expect = 0.005
 Identities = 65/333 (19%), Positives = 133/333 (39%), Gaps = 63/333 (18%)

Query: 449 IETLQKELEEIRSEHEDTKSL----YKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKS 504
           ++ L + L +I S+HE    L    ++ L D         ++V    +  ++ +  LD+ 
Sbjct: 117 LKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELDRL 176

Query: 505 HADYIKENAKIKAM----KDMEDFSLDRAVKSVLEAKLPGVVDIAGNLGKTDAEYKTAIE 560
                ++ A+ + +    +++E+ +L     + LE +   + +    LG      +   E
Sbjct: 177 SNSGDEQRARHQLLSYQLEELENLALGENELAELEQEHKNLTNAETLLGICRQVVEQCSE 236

Query: 561 NAGGNRLNYIV--VKRMDDGARAIQYLKKNNLGRTTFLPLDRINGPEALYLDDEGVVGRA 618
           +  GN LN +   + R+     ++  L +     T  L   +I   EA+     G + R 
Sbjct: 237 SDSGNVLNALTASLNRLSSVNNSVGALNE----ATNLLTSAQIQVEEAV-----GELNRF 287

Query: 619 IDLVEFKPEHENLFRYVFGNTIIVENLDYAKTLSKDHRARFVTLEGEVIEPSGAMIGGRS 678
           +D  +  P      +Y      + E LD   TL++ HR          I+P+        
Sbjct: 288 LDHFDADPAR---LQY------LEERLDTIYTLARKHR----------IQPA-------- 320

Query: 679 RKKSVIKVDIDTSKLE-KLAEDISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKI 737
                     D ++L+ +L E++     TL+   + IERL ++ A+Y+    E    L  
Sbjct: 321 ----------DVAELQQRLLEELE----TLNANDESIERLGDELASYARHYQEKAKELSE 366

Query: 738 IKDLEHKKEGILTNNGVKIKELELESRKLEEEL 770
           ++  +H   G+ +    +I+ L +   +   EL
Sbjct: 367 LR--QHAATGLASAVEQEIQRLGMPGGRFTIEL 397