Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1162 a.a., Chromosome partition protein smc from Pseudomonas fluorescens FW300-N2E2

 Score =  255 bits (651), Expect = 2e-71
 Identities = 282/1237 (22%), Positives = 553/1237 (44%), Gaps = 143/1237 (11%)

Query: 7    IHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQLI 65
            I +  FKSF + + +  P    A++GPNG GKSN ID + +V+G++SAK+LR      +I
Sbjct: 6    IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMTDVI 65

Query: 66   TYHNGKRE--NFAEVTLIFDNKDRKMPVDSD---KVGISRKVKINGDNNYYLIWNEEKEV 120
               +  R+  + A + L+FDN D  +  +     ++ I RKV  +  N+Y+L        
Sbjct: 66   FNGSTSRKPVSQASIELLFDNSDGTLVGEYAAYAEISIRRKVTRDSQNSYFL-------- 117

Query: 121  KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
              NG           K ++ +I D+     L    ++II QG + K+I+  P + R  I+
Sbjct: 118  --NGT----------KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIE 165

Query: 181  EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
            E +G++++ E+  + +  + +  E + ++     E++  LE+L ++ E A+ + +   E 
Sbjct: 166  EAAGISKYKERRRETENRIRRTHENLARLTDLREELERQLERLHRQAEAAKKYQEYKGEE 225

Query: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300
            +  K  L++ + + LN   E+  +    +   +V F   ++E    ++    RL++  ++
Sbjct: 226  RQLKAQLSALRWQALN---EQVGQREAIIGNQEVSFEALVAE-QRNADAAIERLRDGHHD 281

Query: 301  LNEKGN---EEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQK 357
            L+E+ N        +   I  +E ++ + ++ L    DDLK          +  +ET   
Sbjct: 282  LSERFNLVQGRFYSVGGDIARVEQSIQHGQQRLRQLQDDLKEAE-------RARLETESH 334

Query: 358  IETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINES 417
            +   RT  L    E++ L  E E      ++  + +EE+E      ++Q    +    E 
Sbjct: 335  LGHDRTLLLTLGEELDRLTPEQEITSAAAEEAAAALEEAELTMHGWQEQWDSFNLTSAEP 394

Query: 418  QNELYNFKNEFNALENEINK---KSFNLAKNKETI-----ETLQKELEEIRSEHEDTKSL 469
            + +    ++    LE  + +   +   LA+ +  +     +    +L E  +  E T   
Sbjct: 395  RRQAEVQQSRIQQLETSMERLAERQRRLAEERALLAADPEDAAILDLSEQLATSEATLED 454

Query: 470  YKELEDVAVE-LEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDR 528
             +  ED  VE LE  ++ +   L+N+++ Q  L +        N ++ +++ ++  +LD 
Sbjct: 455  LQASEDAQVERLEQLRQALQLALQNQQQAQGELQRL-------NGRLASLEALQQAALDP 507

Query: 529  AVKS---VLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYL 585
               +   + +  L     +A  L K DA ++ A+E   G  L  ++V   D G   +   
Sbjct: 508  GTGTAEWLRDQHLAERPRLAEGL-KVDAGWELAVETVLGADLQAVLVD--DFGGFDLSGF 564

Query: 586  KKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIVENL 645
             + +L         R+  P     D   + G  +D VE + +         G    VE+L
Sbjct: 565  TQGDL---------RLLSPAG---DGVRIPGSLLDKVEAQVD----LSPWLGQVKPVESL 608

Query: 646  DYAKTLSKDHRARFVTLEGEVIEPSGAMIGG---RSRKKSVIKVDI--DTSKLEKLAEDI 700
            + A  L    R +    E  +I   G  +G    R R+ S  +  +     ++++L  + 
Sbjct: 609  EQALAL----RGQLAAGE-SLISRDGYWVGRHFLRVRRASEAESGMLARGQEIQRLGAER 663

Query: 701  SELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKELE 760
             E + ++   + E++ L+ +       +  L   L+     + + +  L+    K+++L 
Sbjct: 664  EEREASVEALETELQNLRAQQRQQENGREHLRRLLQDEARQQGELKAQLSAGKAKVEQLA 723

Query: 761  LESRKLEEELDYLEGSKEELER--------KIEEFTKKISGFTSQR-------------- 798
            L   +LEEE+  L G +  LE         +++E    ++  T QR              
Sbjct: 724  LRRTRLEEEIAEL-GEQRALEHEQIGEARLQLQEALDAMALDTEQRELLLAQRDSLRERL 782

Query: 799  DRISEEIASFENSEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNS 858
            DR+ +E    ++  H   ++      +   K +++   +      +  E L  K  +L+ 
Sbjct: 783  DRVRQEARQHKDHAHQLAVR------LGSLKAQHDSTRQALERLEMQSERLTEKREQLSL 836

Query: 859  NIKE----LSEKRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEK 914
            N++E    L E R  LE+ +   + +V+   E LK  +   ED  ++LR+  +++   E+
Sbjct: 837  NLEEGEAPLEELRLKLEELLD-KRMSVD---EELKTAQIALEDADRELRDAEKRRSQAEQ 892

Query: 915  ELEILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISEDITSK 974
            + +++ G+       + Q   +  +L++ +   + +L E+        +++ +   + + 
Sbjct: 893  QSQLIRGQ-------MEQQRMEWQALTVRRKALQDQLLEDG------YDLDGVLATLVAG 939

Query: 975  IKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLH 1034
              E D    E     +   I++L  +N+ AID+YQ   +R   L  +  D     +   +
Sbjct: 940  ANEKDA---EEELERIAQRIQRLGAINLAAIDEYQQQSERKRYLDAQNDDLVEALETLEN 996

Query: 1035 LIEEVSKRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLE-NPEDPFSGGLLIDASPMNK 1093
            +I ++ K  +  F D + ++    + ++ ++ G G   LE   ED    G+ I A P  K
Sbjct: 997  VIRKIDKETRNRFKDTFDQINGGLQALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGK 1056

Query: 1094 KLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKD 1153
            K  ++ ++SGGEK+LTALA +FAI  LNPAPF +LDEVDA LD  N G    ++K  S+ 
Sbjct: 1057 KNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSET 1116

Query: 1154 SQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
             QFI I+H +  +  +D + GV M E G S+LV + +
Sbjct: 1117 VQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDV 1153