Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1162 a.a., chromosome segregation protein SMC, common bacterial type from Pseudomonas stutzeri RCH2

 Score =  274 bits (700), Expect = 4e-77
 Identities = 276/1238 (22%), Positives = 553/1238 (44%), Gaps = 139/1238 (11%)

Query: 4    LSEIHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62
            L  I +  FKSF + + +  P    A++GPNG GKSN ID + +V+G++SAK+LR     
Sbjct: 3    LKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMT 62

Query: 63   QLITYHNGKRENF--AEVTLIFDNKDRKMPVDSD---KVGISRKVKINGDNNYYLIWNEE 117
             +I   +  R+    A + LIFDN D  +  +     ++ I R+V  +  N Y+L     
Sbjct: 63   DVIFNGSNTRKPVTQASIELIFDNSDGTLTGEYAAFAEISIRRRVTRDSQNTYFL----- 117

Query: 118  KEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRK 177
                 NG           K ++ +I D+     L    ++II QG + K+I+  P + R 
Sbjct: 118  -----NGV----------KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRN 162

Query: 178  IIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLT 237
             I+E +G++++ E+  + +  + +  E + ++     E++  LE+L ++ + AE + +  
Sbjct: 163  FIEEAAGISKYKERRRETENRIRRTHENLARLTDLREELERQLERLHRQAQSAEKYQEYK 222

Query: 238  EELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNL 297
             E +  K  L++ + + LN ++ + ++ I    + +V F   ++E  +    I  RL++ 
Sbjct: 223  AEERQLKAQLSALRWQALNELVGQREQVIG---DQEVAFEALVAEQRSADASIE-RLRDG 278

Query: 298  INELNEKGNE---EIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVET 354
             +EL+E+ N+       +   I  +E ++ + ++ L    DDL+       +    L   
Sbjct: 279  HHELSERFNQVQGRFYSVGGDIARVEQSIQHGQQRLRQLQDDLREAEQARLETESHLGHD 338

Query: 355  RQKIETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERI 414
            R  + T+  E    E E        E    + ++ ++ ++  + Q E   Q   +     
Sbjct: 339  RTLLATLGEELAMLEPEQELSGAAAEESAVQLEEAEAAMQAWQEQWERFNQHSAEPRRAA 398

Query: 415  NESQNELYNFKNEFNAL---ENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSLYK 471
               Q+ +   +     L   +  ++++   LA + E +  L+   E++ +   D ++L  
Sbjct: 399  EVQQSRIQQLEQSLERLAERQRRLDEERALLAADPEDVAILELG-EQLAASELDLEALAA 457

Query: 472  ELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDRAVK 531
              ED+   LE  ++++      +++ Q  L +        N +I +++ ++  ++D   K
Sbjct: 458  AAEDINERLEQLREELQQATRTQQQMQGELQRL-------NGRIASLEALQQAAMDPG-K 509

Query: 532  SVLE-AKLPGVVD---IAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYLKK 587
             V E  +  G+ D   +   L + +  ++ A+E   G  +N +++               
Sbjct: 510  GVAEWLREQGLADRPRLVEGL-RVEPGWELAVETVLGGDVNAVLLDE------------- 555

Query: 588  NNLGRTTFLPLDRIN---GPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIVEN 644
                   F+ +D      G   L    +G V R   L++      +L  ++ G    V++
Sbjct: 556  -------FVAIDLAGFEQGDLRLVSPRQGDVSRPGSLLDLVESRLDLSPWL-GRVRPVDS 607

Query: 645  LDYA-----------KTLSKDHR---ARFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDT 690
            L+ A             +S+D       F+ +       SG +  G+  ++ + + D   
Sbjct: 608  LEQALAARAALGEDESVISRDGYWVGQHFLRVRRASEAESGVLARGQELERLLAERDERE 667

Query: 691  SKLEKLAEDISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKI----IKDLEHKKE 746
            + L  + E ISEL    S  ++E E+ + +    +  + +L+++L      ++ L  +++
Sbjct: 668  AALAVVEERISELRAAQSRLEEEREQQRRRQQEEARIQGDLKAQLSAGQARLEQLGLRRQ 727

Query: 747  GILTNNGVKIKELELESRKLEEEL----DYLEGSKEELERKIEEFTKKISGFTSQRDRIS 802
             +      +    E+E+ +L E      D L+    + E++ E       G   + DRI 
Sbjct: 728  RLDEELAEQQDRREIETEQLGEARLQLQDALDAMAHDAEQR-ETLLASRDGIRERLDRIR 786

Query: 803  EEIASFENSEHSKRIKV------IDENIIAFEKKKNEFENEIKRDAVL---IKEVLIPKI 853
            ++    ++  H   ++V       +    A E+ + +FE  I+R   L   ++E   P +
Sbjct: 787  QDARQQKDHAHQLALRVGSLKAQHESTRQALERLEQQFERAIERREQLTLNLEEGEAP-L 845

Query: 854  SELNSNIKELSEKRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFE 913
             EL   ++EL E+R  +E+               LK+ +   ED  ++LR+  +++   E
Sbjct: 846  EELRMKLEELLERRMGVEEE--------------LKHARLALEDADRELRDAEKRRTQAE 891

Query: 914  KELEILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISEDITS 973
            ++ ++L G+       + Q       LS+ +   + +L E+   L+    +  +  D + 
Sbjct: 892  QQAQLLRGQ-------LEQQRLDWQGLSVRRKALQDQLHEDGYDLHGV--LGTLPADASE 942

Query: 974  KIKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYL 1033
            +  E +++ L          I++L P+N+ AID+YQ   +R   L  +  D         
Sbjct: 943  QGWEAELERLAQR-------IQRLGPINLAAIDEYQQQSERKRYLDAQNDDLVEALDTLE 995

Query: 1034 HLIEEVSKRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLE-NPEDPFSGGLLIDASPMN 1092
            ++I ++ +  +  F + + ++    + ++ ++ G G   LE   ED    G+ I A P  
Sbjct: 996  NVIRKIDRETRNRFKETFDQINSGLQALFPKVFGGGNAYLELTGEDLLDTGVAIMARPPG 1055

Query: 1093 KKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASK 1152
            KK  ++ ++SGGEK+LTALA +FAI  LNPAPF +LDEVDA LD  N G    ++K  S+
Sbjct: 1056 KKNSTIHLLSGGEKALTALALVFAIFQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSE 1115

Query: 1153 DSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
              QFI I+H +  +  +D + GV M E G S+LV + +
Sbjct: 1116 KVQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDV 1153