Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1156 a.a., chromosome partition protein from Sinorhizobium meliloti 1021

 Score =  222 bits (565), Expect = 2e-61
 Identities = 267/1241 (21%), Positives = 542/1241 (43%), Gaps = 149/1241 (12%)

Query: 1    MASLSEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAG 59
            +   + + +  FKSF + ++  I  G T ++GPNG GKSN ++ + +V+G+ S K++RA 
Sbjct: 3    LMKFTRLRLLGFKSFVEPTEFVIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRAS 62

Query: 60   KFNQLITYHNGKR--ENFAEVTLIFDNKDRKMPV---DSDKVGISRKVKINGDNNYYLIW 114
              + +I   +G R   N AEV L  DN DR  P    DSD++ ++R+++           
Sbjct: 63   GMDDVIFSGSGNRPARNTAEVGLYLDNSDRTAPAAFNDSDEIQVTRRIE----------- 111

Query: 115  NEEKEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNE 174
                  +E G +  +     K+ +  ++  +    S  A   +++ QG + ++I   P  
Sbjct: 112  ------REQGSVYRING---KEARAKDVQLLFADASTGARSPSMVGQGRIGELIAAKPQA 162

Query: 175  RRKIIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHV 234
            RR++++E +G++    +  +A+  L+ A   +E++D   +++++ +E LK++   A    
Sbjct: 163  RRQLLEEAAGISGLHSRRHEAELRLKAAETNLERLDDVTSQLESQIESLKRQARQANRFK 222

Query: 235  KLTEELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRL 294
             L+ E++  + IL      F    ++  + E EA   +                   N++
Sbjct: 223  MLSAEIRRHEAIL------FHTRWVQAKEAEAEATSHL-------------------NQI 257

Query: 295  QNLINELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVET 354
              L+ E  +   E       +  ++    +N+ K   G L  L+   +Q E+    ++  
Sbjct: 258  TALVAEKAQAQMEAAKAQAVASLKLPELRENEAKFAAG-LQRLQIARAQLEEDAGRILRR 316

Query: 355  RQKIETIRTETLQKEAEINALKTE----MENLETEKKKLKSKVEESETQTEILKQQERKL 410
            R++++    +  +  A    L  +    +  L+ E+++L+  + E++ +    +++  + 
Sbjct: 317  REELQRRLAQLAEDIAREERLVADNAGILARLDQEEEELRDVLAEADDRGAQARERLDEA 376

Query: 411  SERINESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSLY 470
            +E++  S+  L     E         +     A+N+  IE   ++L E ++       L 
Sbjct: 377  NEKLAASEAGLARITAE---------RAEAQAARNQ--IERALRDLSERQAR------LA 419

Query: 471  KELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDRAV 530
            ++L D   EL+    ++  L  +  E +++++ + A   +  A + A+++    SL  A 
Sbjct: 420  RQLADQGRELDDLDGQMARL-PDPDEKREQVELAEAALEEAEAAVAAVEE----SLAEAR 474

Query: 531  KSVLEAKLPGVVDIAGNLGKTDAEYKTA---IENAGGNRLNYIVVKRMDDGARAIQYLKK 587
                 A+LP V      L   + E +T    +E AGG+    +V +   +  R  +    
Sbjct: 475  ADEAAARLP-VDQARARLNGIETEARTIRRMLEAAGGSTYPAVVEEMKVE--RGFEAALG 531

Query: 588  NNLGRTTFLPLD-------RINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTI 640
              LG     PL+       R+ G +A   +D  +   A+ L++F    E L R       
Sbjct: 532  AALGDDLDSPLEQAAPTHWRMPGDDA---EDPALPAGALPLIDFVQAPEAL-RRALRQIG 587

Query: 641  IVENLDYAKTLSKDHRA--RFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAE 698
            IVE+   A+ L    RA  R VT +G V    G + G  +   + +++            
Sbjct: 588  IVESDGEAERLLPLLRAGQRLVTRQGAVWRWDGHVTGSEAPSAAGLRL--------AQKN 639

Query: 699  DISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKE 758
             +SEL+G   E  D   + +   A    R    + RL++ ++ +      L+     +  
Sbjct: 640  RLSELEGEAEEASDASLKAEAHLAAAGARIRAEDERLRLSREAQRMLARQLSEARDALAV 699

Query: 759  LELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEHSKRIK 818
             E  S  L      L  +K ++E + EE  ++I     +      ++A  +     +  +
Sbjct: 700  AERASGDLARRRAVLAETKLQIEGQAEEIAEEIEA-AKEASAGQPDLAELDLRLSRRTAE 758

Query: 819  VIDENIIAFEKKK------NEFENEIKRDAVLI--KEVLIPKISELNSNIKELSEKRTIL 870
            V  +   A E +        E +  ++R A +   +E    + +    +I  L E+    
Sbjct: 759  VATDRAAAAEARAAHDGLARENDGRLRRLAAIAGERETWAARAASAEDHIATLREREAEA 818

Query: 871  EQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEKE----LEILNGEKRRV 926
             + +           E L +  + ++D  + L    +K EA  +E    L      +R  
Sbjct: 819  REEV-----------EELLDAPDEFDDKRRALMNELQKAEASRREAADRLAEAENHQREA 867

Query: 927  YGRINQNESQINSLSIDKAKYETRL-EEEDRKLYVCENIEQISEDITSKIKEF------- 978
              +     S++  +   + + E RL    +R++ +   I +       ++          
Sbjct: 868  DRQAATALSELAEVREKRGRAEERLVSARERRVEIEARILEALSCAPHEVMRLTGLGSDE 927

Query: 979  ---DVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLHL 1035
               D+  +E     L+   ++L  VN+RA ++ + + +R   L ++R D     ++    
Sbjct: 928  GLPDMRGVERELERLKIERERLGAVNLRADEEQKELSERLAALLKERDDVIEAIRRLRSA 987

Query: 1036 IEEVSKRKKEVFMDVYLKVAENYEKIYTEI--GGSGKLSLENPEDPFSGGLLIDASPMNK 1093
            I+ +++  +E  +  +  V   +++++T +  GG+ +L L   +DP   GL I A P  K
Sbjct: 988  IQNLNREGRERLIAAFDVVNVQFQRLFTHLFGGGTAELQLIESDDPLEAGLEILARPPGK 1047

Query: 1094 KLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKN----AGLIGEMIKN 1149
            K Q++ ++SGGE++LTA+A +FA+   NPAP  VLDEVDA LD  N      L+ EM   
Sbjct: 1048 KPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVLDEVDAPLDDHNVERYCNLMDEMA-- 1105

Query: 1150 ASKDSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
            AS +++F++I+H    +++ + ++GV M E G+S+LV + +
Sbjct: 1106 ASTETRFVIITHNPITMARMNRLFGVTMAEQGVSQLVSVDL 1146