Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1167 a.a., Chromosome segregation protein SMC (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 4e-27
 Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 5/196 (2%)

Query: 999  PVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEEVSKRKKEVFMDVYLKVAENY 1058
            PVN+RA  +   +  +   L  +R D      +    I E+++  +   ++ + +V  ++
Sbjct: 955  PVNLRAEQEAGELDAQITSLRLERDDLVAAIARLRQGIGELNREGRSRLLESFQRVDGHF 1014

Query: 1059 EKIYTEIGGSGK--LSLENPEDPFSGGLLIDASPMNKKLQSLDVMSGGEKSLTALAFLFA 1116
              ++ ++ G G+  L+L   +DP   GL I ASP  K+LQSL ++SGGE++LTA A LFA
Sbjct: 1015 RTLFLKLFGGGRAHLTLIESDDPLEAGLEIMASPPGKRLQSLGLLSGGEQALTATALLFA 1074

Query: 1117 IQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNA--SKDSQFIVISHREQMISKSDVMYG 1174
            +   NPAP  VLDEVDA LD  N      M+++   +  ++F+V++H    +++ D ++G
Sbjct: 1075 VFLTNPAPICVLDEVDAPLDDANVDRFCAMLRHLTDTTGTRFLVVTHHRMTMARMDRLFG 1134

Query: 1175 VCM-ENGLSKLVGLKI 1189
            V M E G+S LV + +
Sbjct: 1135 VTMAERGVSSLVSVDL 1150



 Score = 92.8 bits (229), Expect = 1e-22
 Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 26/257 (10%)

Query: 1   MASLSEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAG 59
           M   + + +  FKSF + ++L I  G T ++GPNG GKSN ++ + +V+G+TSAK LR  
Sbjct: 1   MLHFTRLRLVGFKSFVEPAELMIEPGLTGVVGPNGCGKSNVVEALRWVMGETSAKQLRGE 60

Query: 60  KFNQLITYHNGKR--ENFAEVTLIFDNKDRKMPV---DSDKVGISRKVKINGDNNYYLIW 114
             + +I      R   N AEVTL+ DN++   P     + ++ ++R++   GD + Y + 
Sbjct: 61  DMDDVIFGGTASRPPRNVAEVTLLLDNREGGAPALFNAAQELEVTRRI-ARGDGSLYRV- 118

Query: 115 NEEKEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNE 174
                   NG          K V+  ++  +    +  A    ++ QG +  +I   P +
Sbjct: 119 --------NG----------KDVRARDVQLLFADSATGARSTAMVSQGRVSALIAAKPAQ 160

Query: 175 RRKIIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHV 234
           RR +++E +G+     +  +A+  L  A   +E+++  +  +   L  L+++   A  + 
Sbjct: 161 RRALLEEAAGIGGLYSRRHEAELRLRAAEGNLERLEDVVTALDGQLGGLRRQSRQAARYR 220

Query: 235 KLTEELKATKYILTSKK 251
            L+E ++ T+  L  ++
Sbjct: 221 ALSEAIRQTEAALLRQR 237