Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 360 a.a., DNA replication and repair protein RecF (RefSeq) from Shewanella loihica PV-4

 Score = 48.9 bits (115), Expect = 7e-10
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 44/179 (24%)

Query: 3   SLSEIHMKNFKSFKNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62
           SLS +H+ +F++  +++L++ DG   I G NGSGK++ ++ I F LG    +S R+    
Sbjct: 2   SLSRLHIDSFRNIASAQLQLGDGLNLIYGQNGSGKTSILEAI-FFLG--MGRSFRSHLSQ 58

Query: 63  QLITYHNGKRENFAEVTLIFDNKDRKMPVDSDKVGISRKVKINGDNNYYLIWNEEKEVKE 122
           ++I     K   FA++         +      K+G+ R              + E EVK 
Sbjct: 59  RVIQNDQDKLTLFAQL---------EQGEQETKIGLRR------------YRSGETEVKM 97

Query: 123 NGEIKTVKEEKRKKVKK-SEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
           NGE          KVK+ S + + +    ++ + F+++ +G         P  RR+ ID
Sbjct: 98  NGE----------KVKRLSTLAETLPIQVITPESFSLLFEG---------PKSRRQFID 137