Pairwise Alignments
Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2
Subject, 993 a.a., SMC family ATPase from Methanococcus maripaludis JJ
Score = 147 bits (371), Expect = 4e-39
Identities = 237/1049 (22%), Positives = 452/1049 (43%), Gaps = 192/1049 (18%)
Query: 4 LSEIHMKNFKSFKNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQ 63
+ I M+NF+S +N+ + G T+I+G NGSGKS+ + F L + R Q
Sbjct: 3 IKNIKMENFRSHRNTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENLMQ 62
Query: 64 LITYHNGKRENFAEVTLIFDNKDRKMPVDSDKVGISRKVKINGDNNYYLIWNEEKEVKEN 123
+ + ++ + +G + VK N + ++ N
Sbjct: 63 Q------------------GSASFSVELEFEMMGNTYLVKRKRFQN-----KTDDKLYVN 99
Query: 124 GEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIIDEIS 183
G++ + K K EIL++ + +A I QG++ +I TP +R+++I ++
Sbjct: 100 GKLNAESASEINK-KMEEILEIDNSVFSNA---IYIKQGEIANLIQMTPRDRKEVIGKLL 155
Query: 184 GVAEFDEKGEK---AKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
G+ ++++ EK KK E+ +E + E+ NLEKLK E ++E L EE+
Sbjct: 156 GIEKYEKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEKLKIEVSESEI---LKEEI 212
Query: 241 KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300
KY G LEK K E K L + E A++N ++ L+++I+E
Sbjct: 213 -LKKY-----------GNLEKLKLE-------KNSELTHMEEKFAENNRLKENLKDVISE 253
Query: 301 LNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQKIET 360
IK + + + N K SL+ +++ KN+ S++E+ + +E I+
Sbjct: 254 ---------------IKNINLEIQNFKNSLSLVVEESKNI-SKNEENYKKYLELELNIKE 297
Query: 361 IRTETLQKEA---EINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINES 417
++ + + ++ N LKT E+L E L+ +++++ + LK+ ++ E+I
Sbjct: 298 LKNKLINHKSNYESYNKLKTIEESLIKELNNLEESLKDNKKNPDELKENLKENEEKI--- 354
Query: 418 QNELYNFKNEFNALENEINKKSFNLAKNKETIETL----------QKELEEIRSEHEDTK 467
L K + LE I K+ + + +K+T+ETL K EE++++ +
Sbjct: 355 -LILDKIKEKIKELE-FIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYE 412
Query: 468 SLYKELEDVAVELEY---SKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDF 524
+L KE D+ + + K K+++ L + K+ ++++ N +I+ + ED
Sbjct: 413 NLLKEKNDLEKKFQNETDEKTKLISELTDLKKIEEKI----------NLEIEFKEKYEDL 462
Query: 525 S--LDRAVKSVL--EAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVK---RMDD 577
S +D+ + VL E+K+ + L KT + ++ K +++
Sbjct: 463 SEKIDKLNEIVLKKESKISETKNSKAELEKTKDSCHVCQSKISEEKKQELLEKYNSEIEN 522
Query: 578 GARAIQYLKKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFG 637
+ + LKK ++++ K EH V
Sbjct: 523 EKLSTESLKKQ------------------------------LEIILNKKEHIK----VKL 548
Query: 638 NTIIVENLDYAKTLSKDHRARFVTLEGEVIEPS---GAMIGGRSRKKSV-IKVDIDTSKL 693
N I L Y + K+ + + +E +IE + +IG + S+ ++ + +KL
Sbjct: 549 NEIDSFKLKYGEL--KEKKNYSLKVEESIIETTEKLNELIGKINEYSSLNDEISLIENKL 606
Query: 694 EKLAEDISELDGTLS-ETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNN 752
+ L +D + + TK+E + NK K+EL KII D + K + N
Sbjct: 607 KDLEKDYKNYNYSAQFLTKNEESEILNK-------KLELS---KIIGDYDSSK---IENE 653
Query: 753 GVKIKELELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFEN-- 810
++ L+ E + + L+ K EL+ + + KI G + E + FEN
Sbjct: 654 KKSLENLKDELKNIIYNLEREINLKTELKNIQNDISSKI-GIVECYVKWEAEKSDFENKL 712
Query: 811 SEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKELSEKRTIL 870
SE K + E++ + + EI + E L KI+E ++L E R +
Sbjct: 713 SECKKSYEKYMESLAVLKNYSKTYSVEINN----LNEFLNQKIAEKEHFCEKLLETRLTI 768
Query: 871 EQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEKELEILNGEKRRVYGRI 930
E+NIQ +V N E+ +N K+ YE++ + +++ E EL++ N + +Y +
Sbjct: 769 EKNIQ----SVNYNPEMHENAKKVYENIFNEFNDISRTLERITSELKLKN--ENIIY--L 820
Query: 931 NQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISEDITSK------IKEFDVDALE 984
N+ +I +LS K E R + E+ K Y +++I +I SK ++E + ++
Sbjct: 821 NE---KIQNLS---NKKEERRKIEEFKEY----LDKIKREIFSKDGFQKYLREKYIPLIQ 870
Query: 985 SHQIDLEGHIKKLEPVNMRAIDDYQYIVD 1013
H + +L +++ DDY IVD
Sbjct: 871 RHTNQIFQEF-ELPYSHIQLKDDYSLIVD 898
Score = 94.0 bits (232), Expect = 6e-23
Identities = 201/952 (21%), Positives = 389/952 (40%), Gaps = 163/952 (17%)
Query: 299 NELNEKGNEEIMELHKS-------IKEMEVT-----VDNDKKSLNGALDDLKNVNSQSEK 346
+E+N+K EEI+E+ S IK+ E+ D+K + G L ++ SEK
Sbjct: 108 SEINKK-MEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEK 166
Query: 347 KGQDLVETRQKIETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQ 406
+ + ET+ L+ E E+ +ENLE KLK +V ESE E + ++
Sbjct: 167 MN---IVKKSYEETL----LKLEGELTQEPEILENLE----KLKIEVSESEILKEEILKK 215
Query: 407 ERKLSERINESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEH--- 463
L + E +EL + + +F E N+ NL I+ + E++ ++
Sbjct: 216 YGNLEKLKLEKNSELTHMEEKFA----ENNRLKENLKDVISEIKNINLEIQNFKNSLSLV 271
Query: 464 -EDTKSLYKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDME 522
E++K++ K E+ KK + L N KE +++L ++Y N K+K +++
Sbjct: 272 VEESKNISKNEENY--------KKYLELELNIKELKNKLINHKSNYESYN-KLKTIEESL 322
Query: 523 DFSLDRAVKSVLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAI 582
L+ +S+ + K K E K EN N +++ ++ + + +
Sbjct: 323 IKELNNLEESLKDNK------------KNPDELK---ENLKENEEKILILDKIKEKIKEL 367
Query: 583 QYLKKN----NLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGN 638
++++K + + T ++ + +Y D + +L K +ENL +
Sbjct: 368 EFIEKQIYEIKIHKKT---VETLFDSVKIYDDS---IKTFEELKTKKNSYENLLK----- 416
Query: 639 TIIVENLDYAKTLSKDHRARFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAE 698
E D K + E E + + KK K++++ EK E
Sbjct: 417 ----EKNDLEKKF-----------QNETDEKTKLISELTDLKKIEEKINLEIEFKEKY-E 460
Query: 699 DISELDGTLSET--KDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKI 756
D+SE L+E K E + + KN+ K + + K E KK+ +L +I
Sbjct: 461 DLSEKIDKLNEIVLKKESKISETKNSKAELEKTKDSCHVCQSKISEEKKQELLEKYNSEI 520
Query: 757 KELELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEHSKR 816
+ +L + L+++L+ + KE ++ K+ E I F + + E+ +S +
Sbjct: 521 ENEKLSTESLKKQLEIILNKKEHIKVKLNE----IDSFKLKYGELKEK------KNYSLK 570
Query: 817 IKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLI--PKISELNSNIKEL---------SE 865
++E+II +K NE +I + L E+ + K+ +L + K +E
Sbjct: 571 ---VEESIIETTEKLNELIGKINEYSSLNDEISLIENKLKDLEKDYKNYNYSAQFLTKNE 627
Query: 866 KRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLREL---TEKKEAFEKELEILNGE 922
+ IL + ++ K + + ++N+K+ E+L +L+ + E++ + EL+ + +
Sbjct: 628 ESEILNKKLELSKIIGDYDSSKIENEKKSLENLKDELKNIIYNLEREINLKTELKNIQND 687
Query: 923 KRRVYGRIN-------QNESQINSLSIDKAKYETRLE-----EEDRKLYVCENIEQISED 970
G + + N LS K YE +E + K Y E I ++E
Sbjct: 688 ISSKIGIVECYVKWEAEKSDFENKLSECKKSYEKYMESLAVLKNYSKTYSVE-INNLNEF 746
Query: 971 ITSKI--KEFDVDALESHQIDLEGHIKKLE---PVNMRAIDDYQYIVDRYDEL------- 1018
+ KI KE + L ++ +E +I+ + ++ A Y+ I + ++++
Sbjct: 747 LNQKIAEKEHFCEKLLETRLTIEKNIQSVNYNPEMHENAKKVYENIFNEFNDISRTLERI 806
Query: 1019 -----------------FEKRTDYENEEKKYLHLIEEVSKRKKEVF-MDVYLKVAENYEK 1060
+ ++ + E +K E + K K+E+F D + K EK
Sbjct: 807 TSELKLKNENIIYLNEKIQNLSNKKEERRKIEEFKEYLDKIKREIFSKDGFQKYLR--EK 864
Query: 1061 IYTEIGGSGKLSLENPEDPFSGGLLIDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQH- 1119
I + E P+S L D + ++ +SGGE+ +LA I
Sbjct: 865 YIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGLPVETLSGGEQIAVSLALRLGISKA 924
Query: 1120 -LNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKDSQFIVISHREQMISKSD 1170
N +LDE A LD + + KN +Q +I+H +++ +D
Sbjct: 925 VCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTINQMAIITHHQELEQIAD 976