Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 445 a.a., ATP-dependent RNA helicase PA3950 from Pseudomonas fluorescens FW300-N2E2

 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 35/209 (16%)

Query: 275 EAVKLEHAIEMLETQGKSTFLNYY-------QKLLTQNTKS------AKEITNDPRFIQ- 320
           + + L+ A  ML+        N Y       Q LL   T S      A ++ NDP  I+ 
Sbjct: 150 QTLVLDEADRMLDLGFSEELANIYKALPKKRQTLLFSATFSDAIRLLAGQMLNDPLSIEV 209

Query: 321 -----AVKNLNELDIEHPKYEKMLEIVKEILKENE--KIVIFAQYRDTVQKIVDLLSENE 373
                A   + +  +   K  K  E+   ++++++  ++++FA+ R+ V  +V+ L    
Sbjct: 210 SPRNVAANTVKQWVVTVDKKRKP-ELFVHLMRKHKWKQVLVFAKTRNGVDALVEKLQGLG 268

Query: 374 IEAIMFVGQSNKDGKGMSQKEQAKAIEKFK-NEANVLVSTSVSEEGIDISSVNYVLFYE- 431
           + A    G          Q  + +A+++FK  E  +LV+T V+  G+DI  +  V+ ++ 
Sbjct: 269 VNADGIHGDK-------PQATRQRALDRFKAGEVQILVATDVAARGLDIEDLPLVVNFDL 321

Query: 432 PVPSE--IRMIQRRGRAARGEGGQVIVLI 458
           P+ +E  I  I R GRA  G  GQ I L+
Sbjct: 322 PIVAEDYIHRIGRTGRA--GATGQAISLV 348