Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 441 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 22/169 (13%)

Query: 309 AKEITNDPRFIQ------AVKNLNELDIEHPKYEKMLEIVKEILKENE--KIVIFAQYRD 360
           A+E+  DP  ++      A K + +  +   K  K  E+   +L E    ++++F + R 
Sbjct: 197 ARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKS-ELFLHLLAEKRWGQVLVFVKTRK 255

Query: 361 TVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFK-NEANVLVSTSVSEEGI 419
            V ++VD L    I +    G          Q  + +A+E+FK  E  VLV+T V+  G+
Sbjct: 256 GVDQLVDELQAAGISSDAIHGDK-------PQASRLRALERFKAGEVQVLVATDVAARGL 308

Query: 420 DISSVNYVLFYE-PVPSE--IRMIQRRGRAARGEGGQVIVLIAQKTRDE 465
           DI  +  V+ ++ P+ +E  +  I R GRA  G  G+ + L++    D+
Sbjct: 309 DIHDLPQVVNFDLPIVAEDYVHRIGRTGRA--GATGEAVSLVSADEVDQ 355