Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 605 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 20/210 (9%)

Query: 350 EKIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFK-NEANV 408
           E++++F + +    ++ + L ++ + A    G         SQ  + KA+  FK N+  +
Sbjct: 250 EQVLVFTRTKHGANRLAEYLEKHGLPAAAIHGNK-------SQNARTKALADFKANQVRI 302

Query: 409 LVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQRRGRAAR-GEGGQVIVLIAQKTRDEGY 467
           LV+T ++  G+DI  + +V+ +E    E   + R GR  R G  G+ I L+A    DE  
Sbjct: 303 LVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAP---DEEK 359

Query: 468 YRAG---LAKEKNMKNILKNMQAT-LNKKLKELNEENEEESEKTENKDHYMDLRSVVSSK 523
              G   + K++  +  L    A+ +  +  E+ E  +   ++ E K      R+  + K
Sbjct: 360 LLKGIERMTKQRIPEGDLMGFDASAIEAEKPEVREPRQPRPQRGEGKAR--GERNKPAEK 417

Query: 524 TSDKLEENK--PTKLDKKSKSGLPNKATII 551
            +++ E N+   +K  K ++     +A ++
Sbjct: 418 GAEQKERNRRSQSKSRKPARDSASGEAQVV 447