Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 456 a.a., DEAD/DEAH box helicase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 17/197 (8%)

Query: 341 IVKEILKENE--KIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKA 398
           +++ +L  N   +++IF   R   +++  LL+E         G+       + Q ++ + 
Sbjct: 236 LLERLLSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGE-------LRQAQRNQI 288

Query: 399 IEKFKNEAN-VLVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQRRGRAAR-GEGGQVIV 456
           ++ F  E + +LV+T V+  G+DIS+V+ V+ ++        + R GR  R G  G  I 
Sbjct: 289 MDSFSREHHRILVTTDVASRGLDISNVSLVVNFDMPKFAEEYVHRIGRTGRAGNKGTAIS 348

Query: 457 LIAQKTRDEGYYRAGLAKEKNMK-NILKNMQATLNKKLKELNEENEEESEKTENKDHYMD 515
           L+  K  D  + +  +  +K  + ++L+ ++A    K K L  + E +    + K     
Sbjct: 349 LVGPKDWD-NFLKVQILLQKTFEFSVLEGLEA----KFKGLAPKRERKDAGAKAKAAGKT 403

Query: 516 LRSVVSSKTSDKLEENK 532
            R    +   +K   +K
Sbjct: 404 KRQTADAPKGEKRSRDK 420



 Score = 39.3 bits (90), Expect = 4e-07
 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 17  IYQQLVVASALKQNTLCVLGTGLGKT------AIAALTIAGILSKRNGKVLIIAPSRPLV 70
           I  Q +  +   ++ +    TG GKT      A+  +  +  LSK++ +VLI+ P+R L 
Sbjct: 27  IQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQRVISSKALSKKDPRVLILLPTRELA 86

Query: 71  DQHFKSMNQFL-NIDSEKIVILNGKISPKKREAMWESGKIFIATPQVAENDIISKILKPS 129
            Q +  +   + N     I +L G+    + +A+       +ATP    + +  + L  +
Sbjct: 87  QQVYAQLRLLVANTQYRAISVLGGENFNDQAKALAREPHFIVATPGRIADHLQQRHLFLN 146

Query: 130 QFSLLIADEA 139
              LL+ DEA
Sbjct: 147 GLELLVLDEA 156