Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 48.1 bits (113), Expect = 9e-10
 Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 26/234 (11%)

Query: 244 ITVNKSELLGLNKKIMAMDDNIKYEMLRISSEAVKLEHAIEMLETQGKSTFLNYYQKLLT 303
           I      LL L+++  A  D +   +   +   + +  A E+ E    +   +  Q LL 
Sbjct: 129 IVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELM--ALLPSERQTLLF 186

Query: 304 QNTKSAKEITNDPRFIQAVK-------NLNELDIEHPKY----EKMLEIVKEILKENE-- 350
             T   K +    R+++  K       N    D+E   Y    E+   ++  ++ + +  
Sbjct: 187 SATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHLINKGDWQ 246

Query: 351 KIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFKNEANVLV 410
           ++++F++ +    K+   L E  I A  F G       G   +EQ  A  + + E  VLV
Sbjct: 247 RVLVFSRKKVAADKLAARLCEQGIMAKAFHGDL-----GQGAREQVLADFR-RGEIKVLV 300

Query: 411 STSVSEEGIDISSVNYVLFYE-PVPSE--IRMIQRRGRAARGEGGQVIVLIAQK 461
           +T V+  GIDI S++YV+ YE P  ++  +  I R GRA  G+ G  + L  ++
Sbjct: 301 ATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRA--GKQGVAVTLYCEE 352