Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1070 a.a., Snf2 family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.4 bits (106), Expect = 2e-08
 Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 36/215 (16%)

Query: 262  DDNIKYEMLRISSEAVKLEHAIEMLETQGKS-TFLNYYQKLLTQNTKSAKEITNDPRFI- 319
            D    YE +R+S E    +   E+  TQG + + + +   LL       ++   DPR + 
Sbjct: 844  DQRNLYESIRLSME----KKIRELFATQGVAGSHIEFLDALL-----KLRQACCDPRLVK 894

Query: 320  ----QAVKNLNELDIEHPKYEKMLEIVKEILKENEKIVIFAQYRDTVQKIVDLLSENEIE 375
                Q VKN       + K   + + + E+++E  KI+IF+Q+   +  I +LL   EI+
Sbjct: 895  LEQAQKVKN-------NAKLNWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLEID 947

Query: 376  AIMFVGQSNKDGKGMSQKEQAKAIEKFK--NEANVLVSTSVSEEGIDISSVNYVLFYEPV 433
                 GQ+         + +   I+KF+  +    L+S      G+++++ + V+ Y+P 
Sbjct: 948  YSKLTGQT---------RLRQVQIDKFQEGDTPVFLISLKAGGTGLNLTAADTVIHYDPW 998

Query: 434  PSEIRMIQRRGRAAR-GEGGQVIV--LIAQKTRDE 465
             +     Q   RA R G+   V V  LIA+ T +E
Sbjct: 999  WNPAAERQATDRAHRIGQENPVFVYKLIAEGTVEE 1033