Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 462 a.a., ATP-dependent RNA helicase RhlE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%)

Query: 352 IVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFKN-EANVLV 410
           +V+F + R   +++   L           G+       +SQ+ +  A+E F++   +VLV
Sbjct: 242 VVVFVRTRHGARRLWQQLDNVGFSVTCLQGK-------LSQRRRLAALEGFRDGRYDVLV 294

Query: 411 STSVSEEGIDISSVNYVLFYEPVPSE----IRMIQRRGRAARGEGGQVIVLIAQKTR 463
           +T V+  G+DIS V +V+ Y+ VPS     I  + R GRAAR       V  A + +
Sbjct: 295 ATDVAARGLDISQVTHVVNYD-VPSTADAYIHRVGRTGRAARNGTAMTFVTPADEAQ 350