Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 578 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score = 45.8 bits (107), Expect = 6e-09
 Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 23/240 (9%)

Query: 227 ALKDRLRDLKENRVIHSITVNKSELLGLNKKIMAMDDNIKYEMLRISSEAVKLEHAIEML 286
           A   RL DL++ +   ++  N+ E+L L++    +D     ++ +I +        +   
Sbjct: 129 ATPGRLLDLEQQK---AVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMF- 184

Query: 287 ETQGKSTFLNYYQKLLTQNTKSAKEITNDPRFIQAVKNLNELDIEHPKYEKMLEIVKEIL 346
                +TF +  ++L         EI+  PR   A   + +      K +K   +++ I 
Sbjct: 185 ----SATFSDEIRELAKGLVNQPVEISVTPRNA-AANTVKQWICPVDKNQKSALLIQLIK 239

Query: 347 KEN-EKIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFKN- 404
           +E+ +++++F++ +    ++   L + EI A    G         SQ  + KA+  FK+ 
Sbjct: 240 QEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNK-------SQGARTKALADFKSG 292

Query: 405 EANVLVSTSVSEEGIDISSVNYVLFYE--PVPSE-IRMIQRRGRAARGEGGQVIVLIAQK 461
           E  VLV+T ++  G+DI  +  V+ ++   VP + +  I R GRA  G  GQ + L++ +
Sbjct: 293 EVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRA--GALGQAVSLVSSE 350