Pairwise Alignments

Query, 284 a.a., AmmeMemoRadiSam system protein B from Methanococcus maripaludis S2

Subject, 266 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)

Query: 3   RNPVVAGMFYPAEYHELLEMIEYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSGPV 62
           R   VAG FYPAE   L + + + +       E PS    +  P  ++ PHAGY+YSG V
Sbjct: 4   RQAAVAGRFYPAEPGLLTQQLIHYF------GEAPSV---HIIPKALILPHAGYLYSGEV 54

Query: 63  AAHGYKKISENISGEITAIILGPNH-TGLGSGIATMKGTWKTPFGDMEIDNEFADRLWKE 121
           AA     +  +  G    ++LGP+H  GL         ++ TP G++ ID    + L   
Sbjct: 55  AAKAVNLLRNHPDGYRRVVLLGPSHYVGLNGCALPRSDSFITPLGEIPIDRVGIELLLNR 114

Query: 122 CDILDMDENSHLREHSIEVQLPFLKHLEDLNIAKFKFVPISMMMQDYESCIDVGYVIAKV 181
             +    + +H REH++EV+LP L+   D     F  +P+ +     E+   +   +A  
Sbjct: 115 -RLAIASDMAHQREHALEVELPLLQFCLD----DFILLPVVVGGASPEAVCQLIQAVA-- 167

Query: 182 ARELNRKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISMCGYGP 241
               +   +I+ S+D SHY P   A++ D      IL L D  +  +        CG   
Sbjct: 168 ----DSDTLIVVSSDLSHYHPYLDANRIDTDTRSHILAL-DPHLAPE------QACGCHA 216

Query: 242 VIAMVKAMKDLGARTSYLLYYSTSGDVT--------KDYSEVVGYASLLI 283
           +  ++   K +  +    + ++ SGDVT        +D  EVVGYAS  +
Sbjct: 217 LNGLLAYAKLMNWQIK-CVTHTNSGDVTARAQARRPRDDEEVVGYASFAL 265