Pairwise Alignments

Query, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 142 a.a., NADH ubiquinone oxidoreductase, 20 kDa subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 7   VQLSSCCGCLVSLADTYEQLLDVLGAIDLVYSQTLADVREIPDDVDIVLLEGSVCLSDHH 66
           +   SC GC V LA T       +  +   Y  +       P   DIVL+ G +      
Sbjct: 17  INAGSCNGCDVELATTACIPRYDVERLGCQYCGS-------PKHADIVLVTGPLTARVKD 69

Query: 67  AMEVALESRKKGKILVALGACAASGNITRFSKGNQPSKPVHDSFAPLTEVVKCDLAIPGC 126
            +    E     K+ VA+G C  SG + R S         +    P+   +  D+ +PGC
Sbjct: 70  KVLRVYEEIPDPKVTVAIGVCPISGGVFRES---------YSIVGPIDRYLPVDVNVPGC 120

Query: 127 PPSPESIVAVVLAAL 141
           PP P++I+  +  A+
Sbjct: 121 PPRPQAIIEGIAKAI 135