Pairwise Alignments

Query, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis JJ

 Score = 49.7 bits (117), Expect = 3e-11
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 48  PDDVDIVLLEGSVCLSDHHAMEVALESRKKGKILVALGACAASGNITRFSKGNQPSKPVH 107
           P + D++++ G V  +   +++   +   + K +VA GACA  G +      +  +    
Sbjct: 50  PREADVLVVTGCVTKAVSASLKKIYDEIPEPKAVVAAGACALMGGVYNNIGADLGTSTFI 109

Query: 108 DSFAPLTEVVKCDLAIPGCPPSPESIVAVVLAAL 141
           D   P+  ++  D+ +PGCPP PE ++  ++ AL
Sbjct: 110 DG--PVENIIPVDIKVPGCPPRPEDVITGIVKAL 141