Pairwise Alignments

Query, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 300 a.a., F420-nonreducing hydrogenase from Methanococcus maripaludis JJ

 Score =  117 bits (294), Expect = 2e-31
 Identities = 82/235 (34%), Positives = 113/235 (48%), Gaps = 46/235 (19%)

Query: 1   MVKVAHVQLSSCCGCLVSLADTYEQLLDVLGAIDLVYSQTLADVREIPDDVDIVLLEGSV 60
           MVK+A   L+ C GC +SL D +E LL VL  ++LV+S  L DV+EIPDD+D+ L+EG +
Sbjct: 1   MVKIATTWLACCSGCHISLVDLHEDLLKVLEQVELVHSPVLMDVKEIPDDIDVALIEGGI 60

Query: 61  CLSDHHAMEVALESRKKGKILVALGACAASGNI------------------TRFSKGNQ- 101
              +   + +A E RKK KI++A G CA  G I                  T FS  N+ 
Sbjct: 61  --RNEENLHIAQEMRKKAKIVIAFGTCAVYGGIPGMGNLYSNEALLEKAYKTTFSTKNEE 118

Query: 102 ---PSKPVHD---SFAPLTEVVKCDLAIPGCPPSPESIVAVVLAALNGDMEYL--EPYAE 153
              PS+ V +      PL++V+  D  +PGCPP PE I  V+ + L G    L  +   E
Sbjct: 119 GIIPSEDVPELTSRVKPLSDVIDVDYILPGCPPKPELIAGVLTSLLEGKTPELTTKNMCE 178

Query: 154 LA--KYGSEACGCDLIVKVINKS------------LCMGC---GSCAAACPTRAV 191
           +   +   E    D I +    +            LCMG     SC A CPT  V
Sbjct: 179 VCPREKSKEGVSIDSIKRNYEGTPDPKKCLLEQGYLCMGIATRASCGAICPTAGV 233