Pairwise Alignments

Query, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 410 a.a., periplasmic Fe hydrogenase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 171 INKSLCMGCGSCAAACPTRAVSMDAGR-PLVDKEICIKCGACSVQCP 216
           IN S C GC +C   CPT A++  +G    +D++ C+ CG C + CP
Sbjct: 17  INASKCKGCDACKQFCPTHAINGASGAVHSIDEDKCLSCGQCLINCP 63



 Score = 26.6 bits (57), Expect = 8e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 163 GCDLIVKVINKSLCMGCGSCAAACPTRAV 191
           G    V  I++  C+ CG C   CP  A+
Sbjct: 39  GASGAVHSIDEDKCLSCGQCLINCPFSAI 67