Pairwise Alignments

Query, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 421 a.a., periplasmic [Fe] hydrogenase, large subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 47.0 bits (110), Expect = 6e-10
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 171 INKSLCMGCGSCAAACPTRAVSMDAGRP--LVDKEICIKCGACSVQCP 216
           I+++ C+GC +C+  CPT A+  + G P  +   E CI CG C   CP
Sbjct: 30  IDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCP 77



 Score = 26.9 bits (58), Expect = 6e-04
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 176 CMGCGSCAAACPTRAV-SMDAGRPLVDKEI---CIKCGACSVQCPRIRF 220
           C+ CG C   CP  A+    +  P V+K++    +KC   ++  P +R+
Sbjct: 66  CINCGQCLTHCPENAIYEAQSWVPEVEKKLKDGKVKC--IAMPAPAVRY 112